| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_19981 |
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| Symbol | rplV |
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| ID | 4779401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1644431 |
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| End bp | 1644811 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640085289 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001015818 |
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| Protein GI | 124026703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.508737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACTT CATCTACTAA AACGACAGCC CAAGCTCATG GTCGTTACAT CCGCGGATCT
GCTTCAAAAG TAAGACGTGT TCTTGATCAA ATAAGAGGAA GAACTTATAG GGATGCATTA
ATTATGCTTG AATTTATGCC TTACCGATCA ACTGAGCCAA TAACAAAGGT ATTGAGATCA
GCTGTTGCTA ATGCAGAAAA CAATCTTGGA CTTGACCCTT CTTCTTTGAT GATTTCCACT
GCTACGGCTG ACATGGGGCC ACCAATGAAG CGCTATCGGC CTAGGGCTCA AGGCAGAGCA
TTTGCTATCA AAAAGCAGAC GTGCCACATC AGCATTTCTG TTTCGGCCAC TCAATCAACC
AATTCTGAGG ACTCAGACTG A
|
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| Protein sequence | MTTSSTKTTA QAHGRYIRGS ASKVRRVLDQ IRGRTYRDAL IMLEFMPYRS TEPITKVLRS
AVANAENNLG LDPSSLMIST ATADMGPPMK RYRPRAQGRA FAIKKQTCHI SISVSATQST
NSEDSD
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