| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_19971 |
|---|
| Symbol | rpsC |
|---|
| ID | 4779779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1643697 |
|---|
| End bp | 1644431 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640085288 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_001015817 |
|---|
| Protein GI | 124026702 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATA AAATTCACCC TACCGGAATT AGGCTTGGTA TCACACAAGA ACATCGTTCT
AAATGGTACG CACCAAGTAA AACTTATCCG TTATTGCTGC AAGAAGATGA TCGGATCCGT
ACTTTCATCA AGAAAAAATA TGTAGCAGCA GGCATAAGTG ATGTATTGAT TGCCCGAAAG
GCAGATCAAC TTGAGGTTGA ATTGAAAACT GCTAGGCCTG GAGTAATTGT TGGTAGGCAA
GGAAGTGGGA TTGAAGAACT CAGATCGGGT ATTCAAAAAA CAATTGGTGA TAGAAATAGA
CAAGTCCGCA TAAATGTAGT TGAAGTAGAA AAAGTTGATG CTGATGCTTA TCTTCTGGCT
GAATATATTG CGCAGCAACT TGAAAAGCGT GTTGCTTTTA GACGAACAAT CCGAATGGCG
GTCCAAAGAG CCCAAAGAGC TGGTGTTTTA GGTCTAAAAA TACAAGTGGG TGGAAGGCTG
AATGGTGCTG AAATAGCACG TTCTGAATGG ACACGTGAGG GGAGAGTTCC TCTCCACACT
TTGAGAGCAG AAATTGATTA TGCAACCAAA GTAGCTAGTA CAACCTATGG CGTTTTAGGA
ATCAAAGTAT GGGTTTTCAA AGGCGAAGTT CTGCCTAAAG AAGAACAACC CTTGCCTGTC
GGTTCTTCTC CTCGACGAAG TAGGGGGAAT CGAAGGCCTC AACAATTTGA GGATCGTTCC
AATGAAAGTA AATAA
|
|---|
| Protein sequence | MGHKIHPTGI RLGITQEHRS KWYAPSKTYP LLLQEDDRIR TFIKKKYVAA GISDVLIARK
ADQLEVELKT ARPGVIVGRQ GSGIEELRSG IQKTIGDRNR QVRINVVEVE KVDADAYLLA
EYIAQQLEKR VAFRRTIRMA VQRAQRAGVL GLKIQVGGRL NGAEIARSEW TREGRVPLHT
LRAEIDYATK VASTTYGVLG IKVWVFKGEV LPKEEQPLPV GSSPRRSRGN RRPQQFEDRS
NESK
|
|---|
| |