Gene NATL1_19901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_19901 
SymbolrpsH 
ID4781245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1640942 
End bp1641343 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID640085281 
Product30S ribosomal protein S8 
Protein accessionYP_001015810 
Protein GI124026695 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACC ACGATCCAAT TTCAGACATG CTCACTCGCA TACGAAATGC AAGTGAAAAA 
CGTCATGAAA AAACCAAAGT CCCTGCTTCC AGAATGTCTC TTAGTATCGC TAAGGTTCTT
CAAAGTGAGG GATTCATTGC TGAAATCAAT GAAGAAGGAG AAGGCTTTCG AAAGCAGCTC
ATTCTTGGAT TGAAATATAC TGGGAAGCAT CGCTCACCAA TTATTCGTTC CATGCAGCGA
GTTAGTAGAC CTGGCTTGAG GATCTATAAA AATACTCGAG GATTACCAAA AGTTTTAGGA
GGTCTTGGAA TTGCAATAAT TTCTACCTCT AACGGTGTCA TGAGTGATCG TGATGCTCGC
AAGCAAGGTG TTGGAGGAGA AGTCCTCTGC TACGTCTGTT GA
 
Protein sequence
MANHDPISDM LTRIRNASEK RHEKTKVPAS RMSLSIAKVL QSEGFIAEIN EEGEGFRKQL 
ILGLKYTGKH RSPIIRSMQR VSRPGLRIYK NTRGLPKVLG GLGIAIISTS NGVMSDRDAR
KQGVGGEVLC YVC