| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_19811 |
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| Symbol | rpoA |
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| ID | 4780554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1634849 |
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| End bp | 1635787 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640085272 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001015801 |
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| Protein GI | 124026686 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.509173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTGCAAT ACCAGATAGA CAGGATCGAT CATCAAGTTT CTAATGATCG TTCCCAAACA
GGTGTCTTCC TAATTGGACC TCTTGAGAGA GGTCAAGCAA CAACTTTGGG TAATTCTCTA
CGCAGAGTGT TGATGGGCGG ACTAGAAGGC AGCGCAGTTA CAGCTGTCAG GATTGCAGGA
GTTAATCATG AATATGCAAC AATTCCTGGT GTAAGAGAAG ACGTGCTAGA CATCCTTCTT
AATTGTAAAC AAATTTCAGT TGACAGTCGT AGTCAAGAGC TTGAGATAGG AAGACTTGTT
GTAACAGGCC CCGCTGATGT TAAAGCAAAG GATATTCAGT TCTCATCTCA AGTTGAAGTT
GTTGATGGTG ATCGTCCAAT AGCAACAGTT CAGGAGGGGC ATAACCTAGA ACTAGAAATA
CATGTAGAAA GAGGTGTTGG ATATCGCCCA GTTGACAGAA AAAATGAGGA GACAAGCGCA
ATTGATCTGC TTCAAATAGA TGCTGTATTT ATGCCTATAA ATAGAGTGAA TTTTACTATT
GATGAAACTG CTGTGGCTGA GGGAGGATCA ACCAGAGAAA GATTAAAAAT GGAGTTGGTC
ACCGATGGAT CCACCTCCCC AGACGATGCA TTAGCGGAAG CTGCTAATCA ATTAATCGAA
CTTTTCCAGC CTCTTGCTAC TGTCTCAATG GTAGAAGAGA TTCCTGAAGA GCCAGAGCCT
GCAGCAGAGG CCCAAATCCC CCTCGAGGAG TTAAACTTAT CTGTAAGAGC TTATAATTGC
CTAAAACGAG CCCAAGTGAA CTCTGTTTCA GACTTGATGG GTTTCAGTTA TGAGGATTTA
TTGGAAATTA AGAACTTCGG TTCTAAATCC GCTGACGAAG TTATTGAAGC TCTTGAGAGA
ATTGGAATTT CTATTCCACA AAGTAGAACT TCTGCATGA
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| Protein sequence | MLQYQIDRID HQVSNDRSQT GVFLIGPLER GQATTLGNSL RRVLMGGLEG SAVTAVRIAG
VNHEYATIPG VREDVLDILL NCKQISVDSR SQELEIGRLV VTGPADVKAK DIQFSSQVEV
VDGDRPIATV QEGHNLELEI HVERGVGYRP VDRKNEETSA IDLLQIDAVF MPINRVNFTI
DETAVAEGGS TRERLKMELV TDGSTSPDDA LAEAANQLIE LFQPLATVSM VEEIPEEPEP
AAEAQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER
IGISIPQSRT SA
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