| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_19751 |
|---|
| Symbol | prfA |
|---|
| ID | 4780558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1631087 |
|---|
| End bp | 1632184 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640085266 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_001015795 |
|---|
| Protein GI | 124026680 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTT CAACCCTAAT TAAAAGATTA GAAACAGCTA AAAGTAGTTT TCAAAACTTG
GAGTTGCAAT TAGCTGATCC AGATGTTGCA TCAGATCCAA AACAATTAGA GACAATTGCT
AGAGAAAGAT CCCGTTTAGA GCCTTTGGTT AATGATTATT TAAAGCTCCA GATAATAGAA
AAAGAGTGTC TAGAAGCTAA AGGATTAGTA AAAGAAAGCA GAGATGATAA AGAGATGGAA
CTTTTAGCTA GAGAAGAACT TCAAAATCTC GAACTCTCAA AAAATGAATT AATTCAAAAG
TTGACTTTAG CTCTTTTACC CAAAGATCCA AGAGATGAAA GAAGTGTGAT GCTTGAAATC
AGAGCTGGAG CAGGAGGAAA TGAAGCTTGT TTATGGGCTG GTGATTTAGC AAGAATGTAT
GAAAGATATG GTCAAAAACT TGGATGGAAT GTAAAACCTA TAAGTTCAAC AGAAGCTGAT
ATGGGCGGTT TTCGTGAAAT GATTATCTCT GTCAAAGGAG AGTCTGTTTA CAGCCAATTA
AAATTTGAAG CAGGTGTTCA TAGAGTTCAA AGAGTCCCTT CAACTGAATC TCAAGGACGA
GTTCATACCT CTACTGCAAC TGTTGCTGTA ATGCCAGAAG CTGATCCAGT AGAGGTGAAA
ATAGAATCTA CTGATCTAGA AATTAGTACG GCAAGATCAG GGGGTGCTGG CGGGCAAAAT
GTAAATAAAG TAGAAACAGC TATTGATTTA TTTCACAAGC CCTCAGGTAT AAGAGTTTTT
TGTACGCAAG AACGTTCTCA AATGCAAAAT AGAGAAAGAG CAATGGAGAT TTTAAGAGCT
AAATTATTAG AACTAGAAAT AGCTGAGGCT AATGCAAAGG AAAGATCTGC TCGATTGTCT
CAGGTTGGCA CAGGTGATAG AAGTGAAAAG ATTAGGACAT ATAACTACAA AGATAATCGA
ACAACTGATC ATCGATTAGG AGTTAATTTC CCCCTCGAAC AAGTTCTTTC AGGTCAATTG
GAAGATGTCA TAGGTGCATG TATTGCAGAA GAACAAAAAA GGCAAATGGA AGAGCTTAGT
AATCAATCTG AAGATTAA
|
|---|
| Protein sequence | MDSSTLIKRL ETAKSSFQNL ELQLADPDVA SDPKQLETIA RERSRLEPLV NDYLKLQIIE
KECLEAKGLV KESRDDKEME LLAREELQNL ELSKNELIQK LTLALLPKDP RDERSVMLEI
RAGAGGNEAC LWAGDLARMY ERYGQKLGWN VKPISSTEAD MGGFREMIIS VKGESVYSQL
KFEAGVHRVQ RVPSTESQGR VHTSTATVAV MPEADPVEVK IESTDLEIST ARSGGAGGQN
VNKVETAIDL FHKPSGIRVF CTQERSQMQN RERAMEILRA KLLELEIAEA NAKERSARLS
QVGTGDRSEK IRTYNYKDNR TTDHRLGVNF PLEQVLSGQL EDVIGACIAE EQKRQMEELS
NQSED
|
|---|
| |