Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_19731 |
Symbol | alr |
ID | 4779826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1629295 |
End bp | 1630503 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640085264 |
Product | alanine racemase |
Protein accession | YP_001015793 |
Protein GI | 161407967 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGTA TGTCAAAAAT CAATAGAAGT GAGAGATCTT TCACTTTTGG TGGGTTAACT GAAAATGTAA TTAGCCCTGA TCCTCGCAGT CGTGCATGGG TTGAGGTCGA TTCGAAAATT ATCGAAAATA ATGCAAGAGT TTTGAAAAAC TTTATTGGCG ATGATTGTTC ATTGATGGCA GTTGTGAAAG CTGATGGATA CGGACATGGT GCAGAGACTG TTGCTAAATC TGCGTTAACT GGAGGTGCAG ATAGTCTTGG AGTAGCAACT TTAGAAGAGG GTATTCAATT AAGGAATGCT GGCTTGAAGT GTCAGATATT AATTCTTGGA AATCTAATTA ATTCAGAAGA ACTTTATTCT TCCTTTTGCT GGGATCTTAT TCCTACGATT AGTGGAATTC GTGAGGCAAT AATTTGCAAT AATATCGCTG AAAATAAGCA TAAAAAATTT TTTATTCACT TAAAAGTTGA TACGGGTATG ACGAGACTTG GCTGTGATTG TGATGAAGTA AAAGACTTGA TTTCTAAAAT TGATTATTTA GAAAATATAT CCCTAAAGGG TATATATAGT CATTTAGCAA TTGCTGATAA AGATTTAGAG AAGAATACAA AACTAAATTT TACACAAATT CAGGTAACTA GATTTGAAAA GGTTTTAAAG GATTTGGGTG CTAGAAATAA GTCTTTATGT AGACACCTTG CAAATTCTGC GGGGACTCTT TCAGATAGTC GTCTTCATTT TGACATGGTT CGAGTAGGAC TAAGCTTATA TGGTTATTTT CCTGTAAATG ATTTTGAGTC TGATTTGAGA CTTAAACCTG CCTTGAAGGT CAAGTCTCGA GTTACTTTGG TTAGGGAGGT AGAAAAAGGA ATAGGAGTGG GGTATGGACA TTTTTTTAAA ACTCAAAGGA AAAGTAAACT TGCTGTAGTT GCTATTGGCT ACGCAGATGG CGTCAGCAGA AATCTTTCTG GGAAAATATC AGCCTCAATA GATGGGGTTT TGGTTCCCCA AGTAGGTGCA ATTGCAATGG ATCAAATGGT TTTTGACATA ACCGATAAAC CAGATATTAG AACAGGTCAA GTTTTAACCC TTCTTGGTAC TGATGGTGCA GTTTGTATTT CACCCCAAAA TTGGTGTGAT TTATCTGGAT CAATTCCATG GGAAGTTCTT TGTGGTTTCA GAAATCGTCT TCCTCGAGTT GTCACTTAA
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Protein sequence | MQSMSKINRS ERSFTFGGLT ENVISPDPRS RAWVEVDSKI IENNARVLKN FIGDDCSLMA VVKADGYGHG AETVAKSALT GGADSLGVAT LEEGIQLRNA GLKCQILILG NLINSEELYS SFCWDLIPTI SGIREAIICN NIAENKHKKF FIHLKVDTGM TRLGCDCDEV KDLISKIDYL ENISLKGIYS HLAIADKDLE KNTKLNFTQI QVTRFEKVLK DLGARNKSLC RHLANSAGTL SDSRLHFDMV RVGLSLYGYF PVNDFESDLR LKPALKVKSR VTLVREVEKG IGVGYGHFFK TQRKSKLAVV AIGYADGVSR NLSGKISASI DGVLVPQVGA IAMDQMVFDI TDKPDIRTGQ VLTLLGTDGA VCISPQNWCD LSGSIPWEVL CGFRNRLPRV VT
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