Gene NATL1_19631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_19631 
Symbol 
ID4779336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1621137 
End bp1621889 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content33% 
IMG OID640085253 
Producthypothetical protein 
Protein accessionYP_001015783 
Protein GI124026668 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.333076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAG AGGTTTTGCT AACTAAAGCT TCATTTGTTT TGGGAAGTTT ATGGAAACTG 
CGAATAAATA TTGATGGATT TAAAAGTGAA AATAGTGATG AATTAGTTAC ACAAGCAAGT
ATTGGTAGGA GTTTTCAATT GATTGATTGT TTAAGATCTA ATTTTAAAGA TAAGGAAATT
ATCGATAGAG TTAAAGTGCG TCTTTTGGAA GATGACTATA TTTGTTGGTT TAGATTTTCT
GAATTAATTC ATCAAGCTTC CAAAATAGAA TCATGGGAAT CTGAATTGTT TACTGAAGAG
AGAATTATTT CTAGGATTCC TGAGATATTG TCTTGGACTA AGGCTGCAAA AAAAATTAGT
AATGAATATT TGTGGGGTGG AACGATAGGT CCAAATTTTG ATTGCTCTGG TTTGGTTCAA
TCTGCTTTTG CAAGTTCAGG CATTTGGATA CCAAGAGATG CTTATCAGCA GGAAAAATTC
TGCAAAAATA TTGCATTGGA TATTGAAGCT TTAGGCAAAG ATTTAAAACC TGGTGATTTA
CTTTTCTTTG GATCAACTGA AAAATGTACC CACGTTGGAT TACATATTGA GAATGGTTTT
TATATTCATA GTTCTGGGGT AACTGATGGG CATAATGGAA TAGAGATTGA TGGTTTATTT
CAACCGAACC TTGGGGAAAT TGCTTCTTTT TACAGATCTA AATTTAGATC TGCTGGAAGA
GTGATCTCTT GTTATCAGAG TGAAAAACTC TAA
 
Protein sequence
MTLEVLLTKA SFVLGSLWKL RINIDGFKSE NSDELVTQAS IGRSFQLIDC LRSNFKDKEI 
IDRVKVRLLE DDYICWFRFS ELIHQASKIE SWESELFTEE RIISRIPEIL SWTKAAKKIS
NEYLWGGTIG PNFDCSGLVQ SAFASSGIWI PRDAYQQEKF CKNIALDIEA LGKDLKPGDL
LFFGSTEKCT HVGLHIENGF YIHSSGVTDG HNGIEIDGLF QPNLGEIASF YRSKFRSAGR
VISCYQSEKL