Gene NATL1_19471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_19471 
Symbol 
ID4779462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1599694 
End bp1600356 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID640085237 
ProductATP-dependent protease La 
Protein accessionYP_001015767 
Protein GI124026652 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGAAC TTTCAGTTAG GGAGCTACCA CTTTTCCCAT TGCCTGAGGT TGTGCTTTTT 
CCTCAGGAGT ATTTGCCACT TCATATTTTC GAGACTCGTT ACAGAGTTAT GCTTCAATCT
GTGTTGAAAT CGGATAGCCG TTTTGGAGTC GTTAGATGGG ATCCAATTGC AAAAAAAATG
GCAGATGTAG GTTGTTGCGC TGAGATTATT AAGCATCAAA CTTCACAAGA TGGTAGAAGT
AATATTGTGA CTATTGGACA GCAAAGATTT CGAATTCTTG AAATTATTAG TGAAACTCCT
TTTATTAACG CACTAGTTAG TTGGGTCGAT GATGAACAAA TCTCAGATCA AACCCAATTA
TTGGAACTAA AGGATTCAGT ATCAATTGCT CTAAAGGATG TAGTTTCACT TACCTCAAAA
TTAACTGAAT CTGAGAAAGA ACTTCCTGAT TCTTTGCCTG ATATTCCAAG AGAATTGTCT
TTTTGGATAG CTGCTCATCT TGGCGGTCCA GTAGCAAGCG AGCAGCAAAA TCTATTAGAA
ATAACAAATA CGTTTCACCG TTTGGAAAGA GAATATGAAC TGCTTGATCA CACAAGAAAG
CAATTAGCTG CCAGAACTGC TCTAAAAGAT ACTTTTTCAA ACGCCGATCA AGCCAACAAT
TAA
 
Protein sequence
MSELSVRELP LFPLPEVVLF PQEYLPLHIF ETRYRVMLQS VLKSDSRFGV VRWDPIAKKM 
ADVGCCAEII KHQTSQDGRS NIVTIGQQRF RILEIISETP FINALVSWVD DEQISDQTQL
LELKDSVSIA LKDVVSLTSK LTESEKELPD SLPDIPRELS FWIAAHLGGP VASEQQNLLE
ITNTFHRLER EYELLDHTRK QLAARTALKD TFSNADQANN