| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_19151 |
|---|
| Symbol | livF |
|---|
| ID | 4779745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1575402 |
|---|
| End bp | 1576109 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640085205 |
|---|
| Product | putative ATP-binding subunit of urea ABC transport system |
|---|
| Protein accession | YP_001015735 |
|---|
| Protein GI | 124026620 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGC TACAGATAAA AGGCTTGAAT ACCTACTATG GCGAGAGTCA TATTCTTCGA
GATGTTGATA TGAATATCAA TCAAGGTGAG ATGATTTGTC TTATAGGTCG AAATGGAGTA
GGTAAAACAA CTTTGCTTAA ATCCTTAATA GGTTTATTAA CTCCACGGCG TGGAGAGATT
ATTTTTAATG GAGATTTAGT AAATAGAAAG AAACCTCATC AAAGAGCTCG CTCAGGAATT
GGATATGTTC CTCAAGGACG GGAAATAATA CCTTATCTAA CTGTCGAGGA AAATCTTCAA
CTTGGATTGG AAGCTTTGCC TGGAGGTTTA GCAAAACATA AAAAGATTGA TGAACTTGTA
TATGAACTAT TCCCTGTCTT AAAACAATTT CTAGATCGTA AAGGGGGTGA TTTAAGCGGT
GGACAACAGC AACAACTTGC CATTGCGCGA GCACTACTGG GAAAACCAAA GTTGCTTTTA
CTTGATGAAC CAACTGAAGG AATACAACCG AATATCGTTC AAGATATTGA GTCAGCAGTC
AAAAGGATTA TTAGTGAGAC TGGTGTTGGA GTTTTATTAG TAGAGCAACA TCTGCATTTT
GTGAGGCAAG CTGATCGTTA TTATGCAATG CAACGTGGAG GAATAGTGGC AAATGGCCCA
ACTAGTGAAT TAAGTAAAGC GGTGGTAGAG AAATTCCTTA GTGTTTAA
|
|---|
| Protein sequence | MTMLQIKGLN TYYGESHILR DVDMNINQGE MICLIGRNGV GKTTLLKSLI GLLTPRRGEI
IFNGDLVNRK KPHQRARSGI GYVPQGREII PYLTVEENLQ LGLEALPGGL AKHKKIDELV
YELFPVLKQF LDRKGGDLSG GQQQQLAIAR ALLGKPKLLL LDEPTEGIQP NIVQDIESAV
KRIISETGVG VLLVEQHLHF VRQADRYYAM QRGGIVANGP TSELSKAVVE KFLSV
|
|---|
| |