| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_18381 |
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| Symbol | atpD |
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| ID | 4780646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1500122 |
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| End bp | 1501588 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640085127 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001015658 |
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| Protein GI | 124026543 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.61509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCTT CTGCTACCGC TACTGTTGGA ACTAAGGGTA TTGTTCGCCA AGTAATTGGT
CCTGTTTTAG ATGTTGAATT CCCAGCTGGC AAGCTGCCTT CAATTCTTAA TGCATTAAGG
ATTGAAGGCA AAAATCCTGC TGGGCAAGAT GTTGCACTGA CTGCTGAAGT TCAACAATTA
TTAGGTGATC ATCGGGTTAG AGCCGTCGCT ATGAGCGGAA CTGATGGATT AGTTAGAGGT
ATGGAAGCTT TAGACACAGG AGCTCCAATT TCTGTACCTG TTGGTGAAGC CACCCTTGGA
AGAATTTTCA ACGTCCTTGG GGAACCTGTA GATGAGCAAG GCGACCTTAA GAATGTAACT
ACCTCTCCAA TACACCGATC AGCCCCAAGC CTTACAGATT TAGAAACAAA ACCAAAAGTA
TTTGAGACTG GTATCAAAGT TATCGATTTG CTGGCTCCAT ACCGTCAGGG TGGAAAAGTT
GGATTATTTG GTGGGGCTGG AGTAGGTAAA ACAGTTCTAA TTCAAGAGCT CATAAACAAT
ATTGCAAAAG AGCATGGTGG CGTATCAGTT TTTGGTGGAG TGGGAGAAAG AACTAGAGAA
GGTAACGATT TATATGAAGA ATTTAAAGAG TCTGGTGTGA TTAATTCTGA AGATCTAACC
AAGTCAAAAG TAGCTTTGTG CTTTGGTCAA ATGAATGAGC CCCCAGGCGC AAGAATGAGG
GTGGGCCTAT CTGCCTTGAC TATGGCTGAG CATTTCCGTG ATGTAAATAA GCAAGATGTT
CTTCTGTTCA TCGATAATAT CTTCAGATTT GTTCAGGCTG GATCAGAAGT ATCTGCTTTG
CTAGGGCGTA TGCCATCTGC TGTTGGATAT CAGCCAACCT TAGGAACTGA CGTGGGAGAG
CTTCAAGAAA GGATTACCTC TACCCTTGAA GGATCTATTA CCTCAATTCA GGCTGTTTAT
GTACCTGCTG ACGACTTAAC GGACCCTGCA CCTGCTACTA CTTTTGCTCA CTTAGATGCA
ACTACAGTTT TAGCAAGAGC TCTTGCAGCC AAGGGAATTT ATCCTGCCGT TGATCCACTT
GACTCAACCA GCACAATGTT ACAGCCGTCT GTTGTAGGAG ATGAGCATTA CCGCACGGCC
AGAGCTGTTC AATCAACACT TCAGAGATAT AAGGAATTGC AGGATATTAT TGCGATTTTG
GGATTGGACG AACTATCAGA AGAGGATAGG AAGACAGTTG ATCGTGCCCG CAAAATTGAG
AAATTCTTAT CTCAACCATT CTTTGTTGCT GAAATATTTA CAGGTATGTC AGGTAAATAC
GTCAAATTAG AAGATACGAT TAAAGGTTTC AATATGATTC TTTCAGGTGA ACTTGACCAA
CTCCCTGAGC AAGCTTTCTA TCTTGTTGGA AGCATTGATG AAGTGAAAGC TAAAGCAGAA
AAATTAGCAT CTGAAGCAAA AGCTTAA
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| Protein sequence | MAASATATVG TKGIVRQVIG PVLDVEFPAG KLPSILNALR IEGKNPAGQD VALTAEVQQL
LGDHRVRAVA MSGTDGLVRG MEALDTGAPI SVPVGEATLG RIFNVLGEPV DEQGDLKNVT
TSPIHRSAPS LTDLETKPKV FETGIKVIDL LAPYRQGGKV GLFGGAGVGK TVLIQELINN
IAKEHGGVSV FGGVGERTRE GNDLYEEFKE SGVINSEDLT KSKVALCFGQ MNEPPGARMR
VGLSALTMAE HFRDVNKQDV LLFIDNIFRF VQAGSEVSAL LGRMPSAVGY QPTLGTDVGE
LQERITSTLE GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLARALAA KGIYPAVDPL
DSTSTMLQPS VVGDEHYRTA RAVQSTLQRY KELQDIIAIL GLDELSEEDR KTVDRARKIE
KFLSQPFFVA EIFTGMSGKY VKLEDTIKGF NMILSGELDQ LPEQAFYLVG SIDEVKAKAE
KLASEAKA
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