| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_17861 |
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| Symbol | murD |
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| ID | 4780509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1465369 |
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| End bp | 1466778 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640085075 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001015606 |
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| Protein GI | 124026491 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.863899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAAAAC AAAAACAATC AAATCAAATA TATATTGTAC TGGGACTAGG CTGCTCAGGA
GTAAGTGCAG CAAAACTACT TAAATCAGAA GGAAAGAACG TTTTAGTTTT AGAGAATAAT
TCAAATGAAA ATCTATTAAA TATATCTAAT GAATTAAAAT CAGAAGGAAT CAAAGTTATT
TTACTTGACG AACCACTTCA TATTAATAAT TTCACGCCTT GGATAGAAAG TGTTTGTTCT
ATTACTGTAA GTCCAGGGAT AGATTGGGAG CATATAGCTC TAAAAGAATT AAGAGGTAAG
AATATCAATG TTCAGGGAGA AGTAGAATTA GCTTGGGAAA GATTAACTCA TATCCCTTCT
ATTGGTATAA CTGGAACTAA TGGGAAAACC ACCGTCACTA ACATGCTTAA TCATATTCTT
AAATTAAATA ATTTGAATAC TGATATGGGA GGAAATATTG GAAAAGCATT ATCCAAAATT
GCATTAGAAA ATATGAAAAA TAATAACCAA GAGTTAAACT GGCTAGTACT AGAATTAAGT
AGTTTCCAAA TTGAAGGTTC ACCAAAAGTA GCACCCACCA TAGGTATATG GACAACATTT
ACACCTGATC ATTTAGAAAG ACATAATGAT ATAGAAAGTT ATTTCAAGAT AAAGCGTAGC
TTACTAGAGA AATCATCCAT TCGAATTTAT AATTCTGATG ATCAATTTTT ATCAAGTAAA
AGGAAAGAAT TACCTAAAGG TATATGGGTT GGAACAAATC AACAATCCTT CTACTCTGAA
TATCAGAAAT TTTGGATCGA TCAAAAAGGT TATATATTTG AAGATAAAAA ACAACTATTT
CATAGTTCTA TACTTAAAAT ACCAGGTAAA CATAATTTGC AAAATCTCTT GCTTGTAATA
GCTGCGGCAA GAGAAATAGG GCTTGATGAT TCATCAATAG CTAAATCTAT AAAATCATTT
AGATCAATCC CCCATAGATT GGAGTATTTA GGAAAGATAA ATAATTTAAG CTTTTACAAT
GACAGCAAAG CTACTAATTT CGACTCTTCA ATAACTGGTT TAAAATCTGT TCCTCATCCA
ATAATTTTAC TAGCTGGTGG TATACAAAAG AAAGGAGATT TTATGCCTTG GGTGAAACAA
ATAAAGCAAT CTACTAATGG GATAGTTTTA TTTGGACTGA GTGCAAATAA CTTGAAGGAA
GAATTATTAA TGTCTTCTTA TACAGGAGAA ATAATTATCA AAAAAAATCT AGAAGAAGCA
ACAATAGCAT CTATTAATAT AGCAAGGGAA ACAAATTCAA GAAGCATATT ATTATCTCCA
GCTTGTGCAA GTTTTGATCA ATATAAAAAC TATGAAGAGA GAGGGGACCA TTTCAAAAAT
CTTGTTAAAA AGTATAAATT GATAAAATGA
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| Protein sequence | MSKQKQSNQI YIVLGLGCSG VSAAKLLKSE GKNVLVLENN SNENLLNISN ELKSEGIKVI
LLDEPLHINN FTPWIESVCS ITVSPGIDWE HIALKELRGK NINVQGEVEL AWERLTHIPS
IGITGTNGKT TVTNMLNHIL KLNNLNTDMG GNIGKALSKI ALENMKNNNQ ELNWLVLELS
SFQIEGSPKV APTIGIWTTF TPDHLERHND IESYFKIKRS LLEKSSIRIY NSDDQFLSSK
RKELPKGIWV GTNQQSFYSE YQKFWIDQKG YIFEDKKQLF HSSILKIPGK HNLQNLLLVI
AAAREIGLDD SSIAKSIKSF RSIPHRLEYL GKINNLSFYN DSKATNFDSS ITGLKSVPHP
IILLAGGIQK KGDFMPWVKQ IKQSTNGIVL FGLSANNLKE ELLMSSYTGE IIIKKNLEEA
TIASINIARE TNSRSILLSP ACASFDQYKN YEERGDHFKN LVKKYKLIK
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