Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_17811 |
Symbol | prmA |
ID | 4780058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1460591 |
End bp | 1461526 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640085069 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_001015601 |
Protein GI | 124026486 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.578713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGGTTG AAAAAACTGT AAATTTGCAA AACTCCCAAC TGTCGTGGTT GAGATTGGAG CAGGAATTTT CATTTGAGCT AGAAGATTCT TTTTATTGGC TTTTAAGCAA ACTTGATATT CATAGATTCT CTTTTGAGCA TGATCCAGAT AACAACTCCA CTCAAAAGCT ATTTATATGG CTTCCTTTGA ATGAATGGTC AGTTAGAGAT CAAGAGATAT TAGTCCAATC ATTAATTTCG TTGACAGAAC CTTTTGACTT GACTTTGCCT GAATGCAAAT GGATTCAAGT AAAAGATGAA GATTGGAGCT TAAGTTGGAA AAAAAACTGG AAACCTGATC CCGTAGGAAA ATCAATTTTA ATTTTGCCAG CATGGTTAGA CGTTCCTGAA AAATTTTTAG AACGTAAAAT TATTCGTCTA GATCCAGGTA GTGCTTTTGG CACTGGTAGT CATCCTTCCA CTAGGCTATG CCTTGAAGCC TTGGATAATG AACCTCCGGT AGGTCAAACA ATTGCTGATA TAGGTTGTGG AAGCGGAATA CTGTCTTTAA CTGCATTGAA ATTAGGAGCC AAGAGTACGT TCTCTGTTGA TACTGATTCT CTTTCAATAT CAGCTACTAA AATTAATTCT GCCTTAAATG ATTGTTCTGA AAACCTCTTA AATGTTTTTC TTGGTTCTAT TGAGGAAATT GAGGCGAATA TGCCGAAAGA AAAAATTGAT TTGATCCTAT GCAATATTCT TGCACCTGTC ATAAAATTAT TAGGGCCAAG TTTCGAAAAA ATCATTGGAC ATAAAGGTAA AGTGATTTTA TCGGGTTTGT TAGTTCAGCA AATCAAAGAA CTTCAAGAAT TTTTTTTAAA GCTTGGTTGG CAAGTTCTTG AAATAAAGAA AAAGGATCAA TGGGCCTTAA TGGTTTTGAC TCTTAATTTG TCTTGA
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Protein sequence | MLVEKTVNLQ NSQLSWLRLE QEFSFELEDS FYWLLSKLDI HRFSFEHDPD NNSTQKLFIW LPLNEWSVRD QEILVQSLIS LTEPFDLTLP ECKWIQVKDE DWSLSWKKNW KPDPVGKSIL ILPAWLDVPE KFLERKIIRL DPGSAFGTGS HPSTRLCLEA LDNEPPVGQT IADIGCGSGI LSLTALKLGA KSTFSVDTDS LSISATKINS ALNDCSENLL NVFLGSIEEI EANMPKEKID LILCNILAPV IKLLGPSFEK IIGHKGKVIL SGLLVQQIKE LQEFFLKLGW QVLEIKKKDQ WALMVLTLNL S
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