Gene NATL1_17761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17761 
SymbolelaC 
ID4781274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1457775 
End bp1458719 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content39% 
IMG OID640085064 
Productmetallo-beta-lactamase superfamily protein 
Protein accessionYP_001015596 
Protein GI124026481 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID[TIGR02651] ribonuclease Z 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.529395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.726567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGTCA CTTTTCTAGG AACAAGTTCA GGGGTCCCAA CTCTTAATAG GAACGTATCA 
GCGATGGTAC TAAAGCCTCC ACAAAGGTCA GAATTGTGGT TGTTCGATTG TGGTGAAGGT
ACACAGCATC AGTTCATTAG AAGCAATCTT AAGTTATCTC AAATCAAAAA AATATTTATT
ACCCATATGC ATGGGGATCA TATTTATGGT CTACCAGGAC TTCTAGCAAG TATTGGATTA
GCAGGCAGCA GCTCTGGAAT TGAGTTGTAC GGGCCAGCTC CGCTTAAGAA CTTTATTGAT
TCTTGTCTAT ACAACAGCTC AAGCCGATTG GCTTATTCAC TCAAATTCCA TAGGGTCGAA
AATGCTGCTA ATAATAAAGA AATTTTGTTT GAAGATTCAG AGTTAGAAGT CAAAACTGCT
CCACTCAAGC ATCGAATCCC ATCTTTTGCT TACAGAGTGA ATCAAAAAAC TAGGCCAGGC
AGATTCGATA TAGAGAAAGC AAAATTAAAA GGAATACCTC CTGGTCCAGT TTATGCAGAC
CTTCAGAGAG GGGAGGAAGT GAGATTAGAA GATGGTCGCA TTTTTTCTGG GAAAGAATTC
TGCGGTCCAC CTAGACCTGG GGTAAGCATG GTTTATTGCA CAGATACTGT TTATACAGAA
TCAGCAATTG AGATTTCTAG AAAAGCCGAT CTACTAATCC ATGAATCAAC TTATTCTTAT
AAAGAAACTG AAATGGCATA TGAACGCGGA CATTCAACTG CAACAATGGC CGCTCAGATT
GCTGCAAAAG CGAATGTTGA TCAACTAATT CTTACTCATT TGAGTCCGAG ATATACCCCT
GGCAATCAAA CATGTCCTAA TGATTTGCTT AATGAAGCAA AAGCAATTTT TCCAAATACC
CAGTTAGCAA AAGACTTTCT GCAAATTGAC TTAAATAAAA GCTGA
 
Protein sequence
MQVTFLGTSS GVPTLNRNVS AMVLKPPQRS ELWLFDCGEG TQHQFIRSNL KLSQIKKIFI 
THMHGDHIYG LPGLLASIGL AGSSSGIELY GPAPLKNFID SCLYNSSSRL AYSLKFHRVE
NAANNKEILF EDSELEVKTA PLKHRIPSFA YRVNQKTRPG RFDIEKAKLK GIPPGPVYAD
LQRGEEVRLE DGRIFSGKEF CGPPRPGVSM VYCTDTVYTE SAIEISRKAD LLIHESTYSY
KETEMAYERG HSTATMAAQI AAKANVDQLI LTHLSPRYTP GNQTCPNDLL NEAKAIFPNT
QLAKDFLQID LNKS