Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_17741 |
Symbol | truB |
ID | 4781243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1455466 |
End bp | 1456410 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640085062 |
Product | putative tRNA pseudouridine 55 synthase |
Protein accession | YP_001015594 |
Protein GI | 124026479 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.971864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAAAGC CCTTTGGATT TGTTGTCATT GATAAGCCTT CTGGGCTTAC TTCTCACGAT TGTGTAAATA GACTTAGAAA AGTATTTGGT ATCAGAAAAA TTGGACATTC TGGAACTCTA GACCCAGCAG TTACTGGAGT ACTTCCAATA GCAATAGGTG ATGCGACAAG ATTAATCTCT TATTTACAAG GTTCTAAAGC TTATACAGGA ATCATCCAGT TAGGTGCCAC TACAAATACT GATGATATGC AAGGGGAAAT TATAGAATCA AAAGCTTGGC CCTTAATTAC CCAAAATGAT ATAAATTATC TACTAGAAAA CTTTAGAGGT GAGATATTAC AAAAGCCTCC TATTTTTTCT AGTGTTCACA TTAAAGGTGA GAGAGCTTAT AAGAAAGCAA GAAAAGGAGA AAAATTTGAT TTAATTCCTA AAAAAGTTAC CATCAACAAA TTAAATTTAA TAAGCTGGTC TCAAAATAAA GGTGAGTTAT TAGTTGACGT CGACTGCTCA ACAGGAACAT ACATTAGATC CTTGGCTAGA GACATTGGAG ATAAAATTGG ATGCGGTGGT TATTTAAAAA GTTTACGCCG TACAAAAGCA TATAATTTCA TCGAAAATCA TTCAGTAAAA CTTCCTGAGA AATCAGACTT TTACCCAGAG GAAGATAAAC CTAAAGTTCT TAATCCTAAT ATCTTTTTTA AACATCTTTC TTCTTTTGAA TTAATTTCTG AAGAAGAAAT TATTAGCTGG CGTTCAGGAA GAAAGATCAG TTTTCAGAAT AATATTAAAC GTTTAAAGGT ATCTAAGAAC AATGAAGTTG AAGATAGTTT TATTCATAAT AACAATATAT TAGTATTGAA TAAAGAAAAT AAAATCCTTG GGATCGCTTG CTTAGATGAA AGTTTTGCAA TTAAGCCTAA GGTTGTTTTC AATGCAATTG GTTAG
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Protein sequence | MEKPFGFVVI DKPSGLTSHD CVNRLRKVFG IRKIGHSGTL DPAVTGVLPI AIGDATRLIS YLQGSKAYTG IIQLGATTNT DDMQGEIIES KAWPLITQND INYLLENFRG EILQKPPIFS SVHIKGERAY KKARKGEKFD LIPKKVTINK LNLISWSQNK GELLVDVDCS TGTYIRSLAR DIGDKIGCGG YLKSLRRTKA YNFIENHSVK LPEKSDFYPE EDKPKVLNPN IFFKHLSSFE LISEEEIISW RSGRKISFQN NIKRLKVSKN NEVEDSFIHN NNILVLNKEN KILGIACLDE SFAIKPKVVF NAIG
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