Gene NATL1_17741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17741 
SymboltruB 
ID4781243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1455466 
End bp1456410 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content32% 
IMG OID640085062 
Productputative tRNA pseudouridine 55 synthase 
Protein accessionYP_001015594 
Protein GI124026479 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.971864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAGC CCTTTGGATT TGTTGTCATT GATAAGCCTT CTGGGCTTAC TTCTCACGAT 
TGTGTAAATA GACTTAGAAA AGTATTTGGT ATCAGAAAAA TTGGACATTC TGGAACTCTA
GACCCAGCAG TTACTGGAGT ACTTCCAATA GCAATAGGTG ATGCGACAAG ATTAATCTCT
TATTTACAAG GTTCTAAAGC TTATACAGGA ATCATCCAGT TAGGTGCCAC TACAAATACT
GATGATATGC AAGGGGAAAT TATAGAATCA AAAGCTTGGC CCTTAATTAC CCAAAATGAT
ATAAATTATC TACTAGAAAA CTTTAGAGGT GAGATATTAC AAAAGCCTCC TATTTTTTCT
AGTGTTCACA TTAAAGGTGA GAGAGCTTAT AAGAAAGCAA GAAAAGGAGA AAAATTTGAT
TTAATTCCTA AAAAAGTTAC CATCAACAAA TTAAATTTAA TAAGCTGGTC TCAAAATAAA
GGTGAGTTAT TAGTTGACGT CGACTGCTCA ACAGGAACAT ACATTAGATC CTTGGCTAGA
GACATTGGAG ATAAAATTGG ATGCGGTGGT TATTTAAAAA GTTTACGCCG TACAAAAGCA
TATAATTTCA TCGAAAATCA TTCAGTAAAA CTTCCTGAGA AATCAGACTT TTACCCAGAG
GAAGATAAAC CTAAAGTTCT TAATCCTAAT ATCTTTTTTA AACATCTTTC TTCTTTTGAA
TTAATTTCTG AAGAAGAAAT TATTAGCTGG CGTTCAGGAA GAAAGATCAG TTTTCAGAAT
AATATTAAAC GTTTAAAGGT ATCTAAGAAC AATGAAGTTG AAGATAGTTT TATTCATAAT
AACAATATAT TAGTATTGAA TAAAGAAAAT AAAATCCTTG GGATCGCTTG CTTAGATGAA
AGTTTTGCAA TTAAGCCTAA GGTTGTTTTC AATGCAATTG GTTAG
 
Protein sequence
MEKPFGFVVI DKPSGLTSHD CVNRLRKVFG IRKIGHSGTL DPAVTGVLPI AIGDATRLIS 
YLQGSKAYTG IIQLGATTNT DDMQGEIIES KAWPLITQND INYLLENFRG EILQKPPIFS
SVHIKGERAY KKARKGEKFD LIPKKVTINK LNLISWSQNK GELLVDVDCS TGTYIRSLAR
DIGDKIGCGG YLKSLRRTKA YNFIENHSVK LPEKSDFYPE EDKPKVLNPN IFFKHLSSFE
LISEEEIISW RSGRKISFQN NIKRLKVSKN NEVEDSFIHN NNILVLNKEN KILGIACLDE
SFAIKPKVVF NAIG