Gene NATL1_17561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17561 
SymboltyrS 
ID4780485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1437029 
End bp1438276 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content33% 
IMG OID640085044 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001015576 
Protein GI124026461 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATA ACATCAATGA ATTACCTGAT TGGATCTCTA GAGGGTTAGA TGATCTCTTC 
CCTAATGATA ATTCAGGAGA TTCAGATCAA AGCTTTCTAA AAAGATTAGA ACTTTCATCT
GTAGATAAAA ATCCTTTACG TGTAAAACTT GGAATTGATC CAACAGGAAC TGATATTCAT
ATAGGTCATA GCATTCTTTT TAGAAAATTA AGAGCTTTCC AAGATGCTGG ACATACGGCA
ATACTTATAA TCGGAGATTT CACAGCAAGG ATTGGAGACC CAACTGGAAA AAGTAAAACT
AGAATTCAGC TTTCAAAAGA TGAGGTTGAA GCAAATGCGT TGAATTACCT TGAGCAATTA
GGACTTGGTA AAGAGCCCAA AGATTCATTA CTTGATTTTT CAACTCCCAG TCGCATAGAA
ATCAGAAGAA ATAGTGAGTG GCTTGAAAAT CTAAATTTGT CTAAAGTTAT AGAACTTTTA
TCAAATTCAA CAGTTGGTCA AATGCTGGCT AAGGAAGACT TTAGTAATCG ATATAAATCT
GGCACTCCTA TATCTCTTCA TGAATTTCTT TATCCGCTTC TTCAAGGATA TGATTCTGTT
GCGATCAATT CTGATGTGGA ACTTGGTGGT ACAGATCAAA AATTTAATAT TGCTATGGGG
CGAGATCTTC AAAGAGCTTT TGGACAGAAA CCCCAATTTG GAATGCTATT ACCTATTTTA
GTTGGATTAG ATGGGACACG AAAAATGAGT AAAAGCTTAG ACAATATTGT AGGAATAAAT
GAAGATTCAT TATCTATGTA TTCAAAATTA GAAAAGGTTC CAGATGATTT GGTTCTTACA
TATTTAAATT TACTCACTAA TGAAAACTTA AAAGAATTAA GTTCAAATCC AAGAGAGGTT
CAAAAATTTA TGGCTTTAAA AATAACATCT AATTTTAAAG GGATTGAGGC AGCAAAAAAT
GCTCAATTTA ATTCTGAAAA ATTAGTTTTA GGTACTAAAG ATTCTCTTGA GGAAATACCA
GAAGCATCAG TTTCTAATGT GAATTTTCCA GCTAAAGCAT TTTATTTATT TAGTAAGATG
GAAATGTGTT CAAGTAGCAG TGAAGCAAGA AGACAAATTC TTGGAGGAGG AGTGAGAATT
GATGGGGAAA AAATTATGGA TCCTAATTTA GAGTTTCACA CTCCAGATGA TCTCATAGGA
AAAATATTAC AAGTAGGAAA GAAGAAATTT CTTCGTGTTT CAACTTGA
 
Protein sequence
MLDNINELPD WISRGLDDLF PNDNSGDSDQ SFLKRLELSS VDKNPLRVKL GIDPTGTDIH 
IGHSILFRKL RAFQDAGHTA ILIIGDFTAR IGDPTGKSKT RIQLSKDEVE ANALNYLEQL
GLGKEPKDSL LDFSTPSRIE IRRNSEWLEN LNLSKVIELL SNSTVGQMLA KEDFSNRYKS
GTPISLHEFL YPLLQGYDSV AINSDVELGG TDQKFNIAMG RDLQRAFGQK PQFGMLLPIL
VGLDGTRKMS KSLDNIVGIN EDSLSMYSKL EKVPDDLVLT YLNLLTNENL KELSSNPREV
QKFMALKITS NFKGIEAAKN AQFNSEKLVL GTKDSLEEIP EASVSNVNFP AKAFYLFSKM
EMCSSSSEAR RQILGGGVRI DGEKIMDPNL EFHTPDDLIG KILQVGKKKF LRVST