| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_17491 |
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| Symbol | glgX |
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| ID | 4781125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1429812 |
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| End bp | 1431872 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640085036 |
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| Product | putative isoamylase |
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| Protein accession | YP_001015569 |
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| Protein GI | 124026454 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAAAAG TAAAAGTTGG TTCAGCATGG CCTTTGGGTA GCTCCGTTAC TCTTGATGGG
GTTAATTTCT CTATCGCAGC ACCACATGCA ACAAATTTAG AATTATTAAT CTTCCAGAGT
GCAGATGACG AGTATGCAAA AGAAACAATA TCCTTAGATC AGAAAAATAG GTCTGGAGAT
TATTGGCACG TTGAAATAGA GGGTCTAGCT GAAGGAACTT TATATGGATA TAAAGTATCA
ATTGATGGGC AAAAAGCTGC CGAGGATCAT ATTGTTTTAG ATCCATGTGC TAGAGCAATT
ACAGGGTGGG AGAATTACAT AAGGAATCAT AAAGAAAAAG TGAATAGAGG TTACGCTCAT
TGCCTCAAGG GAGTAGTAAC TAAAAGAGAT TATTTTGATT TCAAATCTCA CCCTAGGCCT
AAACATTCAT GGAATAAAAC TATTATTTAT GAATTACATG TTGGTGGATT TACGAAAAGC
AATGATTCAA GTATTAGTGA AAGTAAGAAA GGTACATTTT TAGGATTAAT TGAAAAGATA
CCTTATCTTA AAAGTCTTGG CATTACGACT ATTGAATTGC TTCCGGTATT CGCTTTTGAT
TCTAATGATG CCCCTGAAGG ACTTGTTAAC TATTGGGGAT ATAGTCCTAT CAATTGGTTC
ACGCCACATC AAGATTTTGT AGATAGTTGT AATCCATTAG AAGCTAGGAG ACAATTCAAA
AAGTTAGTAG AAGTTTGCCA TGATAATGAG CTAGAAGTAT TAATAGATGT TGTTTATAAT
CACACAACAG AAGGGAATCA AAATGGTCCA AGTATAAGTT GGAAAAGTTT TGGTCCTAAA
ACTTACTATC ATCAAGACGA TAAGGAAAAT TACCAAGATG TGAGTGGATG TGGAAATAGT
ATTGCCGCTA ATCGTCCTTT AGTTAGAAAA TTAATATTGG AATCATTGCG TTGTTGGGCA
ATTGAGTTAG GTGTTGATGG ATTTCGTTTT GACTTAGGTA TTGCTTTGAG TAGAGGCGAA
AATTTAATTC CTTTAGATAA ACCTCCCTTA TTTGAAGAAA TAGAAGCAGA TCCTAAACTA
AGCGATGTGA AGTTAATCAG TGAGCCTTGG GATTGTGGTG GACTTTACAA ACTAGGTGAT
TTTCCAGCGA AACAATTCAG AACTTGGAAT GGTCATTTTA GAGATGATAT TAGACGATTT
TGGAAAGGAG ATAAAGGCAC AATCTGGCCA CTTAAAGATA GATTAATAGG TAATAAGTCC
CTATATAATG ATAATAATTT AGCAAATATA TTTAGTATTA ATTTCATAAC TTCTCATGAT
GGATTCACAT TAAAAGATCT AGTTAGTTTT AACAAAAAGC ATAACCTTGC AAATGGGGAA
AATAATAGAG ATGGGGAGAA CAATAATAAT AGTTATAATT ATGGAGTTGA AGGACCAACT
ACTGATAAAG AAATAAATAA TTTAAGGCAA AAACAACAAA GAAATCTTCT TGCAACACTT
CTTTTATCTC CTGGAATACC AATGATTTTA ATGGGAGACG AATTAGGTAG AAGCCAAGGA
GGAAATAACA ACACATGGTG CCAAGACAAC CCACTTGGTT GGATGGATTG GAATCACAAC
AATTGTGATC ATGACTTAAA AGAATTTGTA TTAAAGCTGA TATCTCTAAG GAAACAACTA
TCTGAATTTT TCAGTCCTGA TATTATTTAT GATTGTCAAA AAGATAATAC CAAGGTCAAA
ACATCTCATT TTTGGATTCA GTGGCATGGC ATTAAAGTTA ATAAACCTGA CTGGGGTGAC
TGGTCACATA CTCTTGGATT TAGCATTAAC AAAAACAATG ATGGCTCAGC AATCTGGCTT
GGCTTCAATG CTTACAAAGA ATCAATGCTT TTTGACTTAC CAACCCCAAT TTCTCCTTGG
AAAAAATACA TTGATACGTC TATCTTGAAA ACTAAAAATG TCTCCAAAAA ACCCCTAGCG
AATCAATCAA ATGTTCGGAT TGAAAGTAAT AGTCTTGTTC TTATGGTCTC CAGCGAGTAT
TCAAAAAAAA TTAAGCTATG A
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| Protein sequence | MGKVKVGSAW PLGSSVTLDG VNFSIAAPHA TNLELLIFQS ADDEYAKETI SLDQKNRSGD
YWHVEIEGLA EGTLYGYKVS IDGQKAAEDH IVLDPCARAI TGWENYIRNH KEKVNRGYAH
CLKGVVTKRD YFDFKSHPRP KHSWNKTIIY ELHVGGFTKS NDSSISESKK GTFLGLIEKI
PYLKSLGITT IELLPVFAFD SNDAPEGLVN YWGYSPINWF TPHQDFVDSC NPLEARRQFK
KLVEVCHDNE LEVLIDVVYN HTTEGNQNGP SISWKSFGPK TYYHQDDKEN YQDVSGCGNS
IAANRPLVRK LILESLRCWA IELGVDGFRF DLGIALSRGE NLIPLDKPPL FEEIEADPKL
SDVKLISEPW DCGGLYKLGD FPAKQFRTWN GHFRDDIRRF WKGDKGTIWP LKDRLIGNKS
LYNDNNLANI FSINFITSHD GFTLKDLVSF NKKHNLANGE NNRDGENNNN SYNYGVEGPT
TDKEINNLRQ KQQRNLLATL LLSPGIPMIL MGDELGRSQG GNNNTWCQDN PLGWMDWNHN
NCDHDLKEFV LKLISLRKQL SEFFSPDIIY DCQKDNTKVK TSHFWIQWHG IKVNKPDWGD
WSHTLGFSIN KNNDGSAIWL GFNAYKESML FDLPTPISPW KKYIDTSILK TKNVSKKPLA
NQSNVRIESN SLVLMVSSEY SKKIKL
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