Gene NATL1_17361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17361 
SymbolilvC 
ID4779104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1421546 
End bp1422541 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content40% 
IMG OID640085023 
Productketol-acid reductoisomerase 
Protein accessionYP_001015556 
Protein GI124026441 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC TTTTTTACGA TTCCGATGCA GACCTAGGTC TTCTTCAGGA TAAAACCGTT 
GCAATTATTG GCTATGGATC GCAAGGCCAC GCGCATGCAT TGAATTTAAA AGATAGTGGC
ATCAAAGTTG TTGTTGGGCT TTATGAAGGA AGTCGATCAG CTAGCAAAGC AAAATCTGAT
GGATTGGAAG TTTTAAGCGT CGCGGAGGCT TCAGAAAGGG CAGATTGGAT CATGATACTT
TTGCCTGATG AATTTCAAAA AGATGTTTAC TCCAAAGAGA TAGCACCTCA TTTAAAAGCT
GGAAAAATAC TAAGTTTTGC TCATGGTTTC AATATTCGCT TTGAATTAAT AAAACCTCCT
GAATTTGTCG ATGTAGTAAT GATTGCCCCA AAGGGACCAG GTCACACTGT CAGATGGGAG
TATCAAAATG GCCAAGGTGT TCCTGCTTTA TTTGCAATTG AGCAAGATGC CTCAGGCAAT
GCAAGAGCAC TTGCGATGGC ATATGCAAAA GGTATTGGCG GAACACGCGC TGGGATTTTA
GAAACCAATT TCAAAGAAGA AACTGAAACT GATCTTTTTG GAGAACAAGC AGTTTTATGT
GGAGGCCTTT CAGAGTTGGT CAAAGCTGGT TTTGAGACTC TTGTTGAAGC TGGTTATCAA
CCTGAATTGG CCTACTTTGA ATGCTTACAC GAAGTCAAGC TAATAGTTGA CCTCATGGTT
AAAGGAGGTC TAACTGCAAT GAGGGATTCG ATTTCAAATA CAGCTGAGTA TGGAGATTAC
GTAAGCGGTC CAAGATTAAT AACCAAAGAG ACAAAAGAAG AAATGAAAAA TATTCTTGCC
GATATTCAAG ATGGTACTTT TGCTAAAAAC TTTGTAAAAG AATGCGATGC AGGCAAACCT
GAAATGAAGA GAATTCGCCA AAAAGACTCA GAACTTCCAA TAGAAAAAGT AGGAAAAACA
CTTCGCTCGA TGTTTAGTTG GCTTAAATCA GACTAA
 
Protein sequence
MAKLFYDSDA DLGLLQDKTV AIIGYGSQGH AHALNLKDSG IKVVVGLYEG SRSASKAKSD 
GLEVLSVAEA SERADWIMIL LPDEFQKDVY SKEIAPHLKA GKILSFAHGF NIRFELIKPP
EFVDVVMIAP KGPGHTVRWE YQNGQGVPAL FAIEQDASGN ARALAMAYAK GIGGTRAGIL
ETNFKEETET DLFGEQAVLC GGLSELVKAG FETLVEAGYQ PELAYFECLH EVKLIVDLMV
KGGLTAMRDS ISNTAEYGDY VSGPRLITKE TKEEMKNILA DIQDGTFAKN FVKECDAGKP
EMKRIRQKDS ELPIEKVGKT LRSMFSWLKS D