| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_17351 |
|---|
| Symbol | clpP |
|---|
| ID | 4779115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 1420814 |
|---|
| End bp | 1421416 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640085022 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_001015555 |
|---|
| Protein GI | 124026440 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAG GTACTCCAAG CGTTCCATAC CGTCTTCCAG GAAGTCAATT CGAAAGATGG
GTTGATATTT ACACAAGACT AGGTGCGGAA AGAATTCTAT TCCTTGGTCA AGAAGTAAAC
GACGGCATTG CAAATAGCCT CGTAGCACAA ATGCTTTATC TTGATTCTGA GGATAGTAGC
AAGCCGATCT ATTTGTATAT CAATAGTCCT GGAGGGTCCG TAACCGCGGG TTTAGCTATC
TATGACACGA TGAAATATGT AAAAAGCGAC CTAGTAACTA TTTGTGTTGG GTTGGCGGCC
TCGATGGGTG CTTTTTTACT CTCTGCAGGA ACAAAAGGCA AAAGGCTTGC ATTACCCCAC
AGCAGAATCA TGATTCACCA GCCACTTGGC GGTACTGCGC AAAGACAAGC AAGTGACATA
GAGATTGAAG CACGTGAAAT TCTTAGAATT AAAGAAATGC TCAATAAATC AATGGCAGAA
ATGACGGGAC AAACATATGA AAAGATAGAA AAAGATACTG ATCGTGATTA CTTTTTGAGC
GCGGAAGAAG CAAAAAATTA CGGTCTAATC GACCGAGTAA TTACACATCC AAGTGAAAGT
TAA
|
|---|
| Protein sequence | MPIGTPSVPY RLPGSQFERW VDIYTRLGAE RILFLGQEVN DGIANSLVAQ MLYLDSEDSS
KPIYLYINSP GGSVTAGLAI YDTMKYVKSD LVTICVGLAA SMGAFLLSAG TKGKRLALPH
SRIMIHQPLG GTAQRQASDI EIEAREILRI KEMLNKSMAE MTGQTYEKIE KDTDRDYFLS
AEEAKNYGLI DRVITHPSES
|
|---|
| |