| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_17101 |
|---|
| Symbol | |
|---|
| ID | 4780155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1395291 |
|---|
| End bp | 1396982 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640084994 |
|---|
| Product | fused sugar kinase/uncharacterized domain-containing protein |
|---|
| Protein accession | YP_001015530 |
|---|
| Protein GI | 124026415 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.343407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCAG TCTTTTTAAT GTTTTCTCGA CTGTTTCTTC TGAAGGCAAA TGATTTAAAA
CTTTTTTTGT TTCTCTTGTT TCCACATTCA TGGGCATTGA TGATAGTAGC TTCTATTCAT
AGTGGGTTTG GTTGCTTTTT GATTTTGAAT TGGCCTCAAT CTGATTCGGA ACATTTGATG
GTTTCTTCAG AGCAGATGCA AAACATAGAA AAAGAAATGT TTTCTATGGG TATGCCTGTT
GAAGCTCTGA TGGAAAAAGT GGGAATTGGT ATTTCTTCAT GGATATTAGA CAGGCATGGG
TTGATTGAAA ATGGTGCAAT CGTTTTGGTA GGGCCTGGTC ACAATGGAGG CGATGGACTT
GTTGTTGCGA GAGAACTTTA TATGGCAGGC GTTGATATCT CTATTTGGTG TCCATTCCCA
TTGAAAAAAC AATTAACACA AAAACATTTT GATTATGCAA TGCAGATTGG GATTGAAAAC
TTGGAGCGTA AACCTGATTC AAATTCAGAT TTATTATGGA TTGAGGCTTT ATTTGGATTA
GGACAATCAA GAATTATTTC TGATGAAATA CTTCGCCTAT TGAATTCGAA GAAGACATTT
AGTCCTGAAA AGTTAATTAG TATTGATGTC CCCGCAGGAT TAGACTCAGA TAATGGAAAT
ATAGTATCAA ATACACCATG CAAAGCCAGT TCTTCGTTAA CCTTGGGTTT ATTTAAGTCG
GGATTAATTC AAGATTCAGC TATTGATTAT GTAGGTAATT TAGAGAGAGT AGATATTGGA
ATTCCAGATA AGATATTAGC TGGTTTTCCT GAAACACAGC CTCTAAGGAT TTCTTTTTCA
GATTTGTCTA CTTTTGTTTG GCCCATGCTT AGTAAAAGTA AAAGTAAATA TCAGAGAGGA
AGAGTTCTGG TGATTGCAGG GAGTGAGAAA TACAGGGGAG CAGCATCCCT TGCTTTGAAT
GGAGCTTTAG CAAGTGGGGT AGGTAGTGTT AGTGCTTTTT TGCCCAATTC CGTTTCATCT
GCTCTTTGGA TTACTCACCC TGAAGTCTTG TTACTTGGAG ATCTAAATGC TTTTCAAGAC
GGTTCTTCAG ATTTCTCCAA AGTTTTAAAT GAAGTTGACT TGAATAGGTT TGACTCGATT
TTGCTCGGAC CAGGATTGGG GATGGCAGAA GAAAAAGATT GTTTTGGTTC TGACTTGCAG
GATTTCAAAG GCCTACTTGT TCTTGATGCT GATGCAATTA ATAGGCTGTC AATAACATCA
AAAGGTTGGG AGTGGCTAAA TGATAGGGAA GGTCCCACTT GGCTTACCCC TCATCTTGAA
GAATTTAAAA GGTTATTTCC TTTAATTGAT TGCTCGAATC CATTGAAGGC TGGAATTGAA
GCTGCAAAAA CTTGCAGTTC TACTGTCTTA TTGAAATGTG CTCATAGTGT TATCTCTGAT
CCAGAAGGTA AAACTTGGCA AATAGGGCAA GTGAATTCAA GTGTTGCAAG AACTGGCCTT
GGCGATGTTT TGGCTGGGTT TGTTTCAGGG ATGGGTGCTT CCGGACTGGC AAGTGATAAA
AAATTGGATT CAAGTTTGCT TGCTGCGTCA GCTTTGATGC ATGCATATGC AGGGGCTTTT
TCTATAAAAG GGAGCACAGC GAGCACTATT TGCACTTTTC TTGGTGAATT AATAAAAAAG
GAAAGCACTT GA
|
|---|
| Protein sequence | MFAVFLMFSR LFLLKANDLK LFLFLLFPHS WALMIVASIH SGFGCFLILN WPQSDSEHLM
VSSEQMQNIE KEMFSMGMPV EALMEKVGIG ISSWILDRHG LIENGAIVLV GPGHNGGDGL
VVARELYMAG VDISIWCPFP LKKQLTQKHF DYAMQIGIEN LERKPDSNSD LLWIEALFGL
GQSRIISDEI LRLLNSKKTF SPEKLISIDV PAGLDSDNGN IVSNTPCKAS SSLTLGLFKS
GLIQDSAIDY VGNLERVDIG IPDKILAGFP ETQPLRISFS DLSTFVWPML SKSKSKYQRG
RVLVIAGSEK YRGAASLALN GALASGVGSV SAFLPNSVSS ALWITHPEVL LLGDLNAFQD
GSSDFSKVLN EVDLNRFDSI LLGPGLGMAE EKDCFGSDLQ DFKGLLVLDA DAINRLSITS
KGWEWLNDRE GPTWLTPHLE EFKRLFPLID CSNPLKAGIE AAKTCSSTVL LKCAHSVISD
PEGKTWQIGQ VNSSVARTGL GDVLAGFVSG MGASGLASDK KLDSSLLAAS ALMHAYAGAF
SIKGSTASTI CTFLGELIKK EST
|
|---|
| |