| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_17091 |
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| Symbol | |
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| ID | 4780835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1394192 |
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| End bp | 1395133 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640084993 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001015529 |
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| Protein GI | 124026414 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.428948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCAA CTGCACCCAA GCCTGCTGAA TCACAAAAAC GACGCAGCAG TGATCCAATT
AGTTGGTACC TTTCCTCCAT AGGACGAGTT CCTCTTTTAA CTCCTGCTGA GGAAATTGAA
CTTGGTAATC AAGTTCAAAC TTTGATGAGT CTTACCGAGG ATGGCCAGAT TAAAGAACAG
AGCAAAGAAT TTACCTCTCA TCAAAGAAGA TTGATTCGAA TTGGAAGAAG GGCAAAGGAA
AGAATGATGA AGGCCAATCT TCGATTGGTT GTCAGTGTTG CAAAGAAATA TCAGGGAAAA
GGCCTTGAAC TTTTAGATTT AGTTCAGGAA GGTTCTCTTG GGTTAGAAAG AGCGGTAGAA
AAATTTGACC CTACTCGTGG ATATAAGTTT TCTACTTATG CATTTTGGTG GATAAGGCAA
AGCATGACTA GAGCAATAGC TTGCCAGTCA AGAACAATCC GATTACCTGT TCATTTAAGT
GAGAGATTAG CGACCATTAG AAAAGTCAGC TTAGATTTGG CTCATAAGCT CGGTGCAATG
CCCAGCCGTA TTGAAATAGC TGAGGCAATG GAAATTGAGT TAGAAGAACT TGATTCGATT
TTGAGACAAG CTCTGACCAC AAGCAGTCTT GACGCACCCG TTAATGGAGA TGAAGGTCGT
AGCTTTTTAG GTGATCTAAT AGCTGACGGT TCTGGAGAAG AACCTCTAGA TAAGGTAGAA
CAAAAAATTC ATCAAGAACA ACTTGGAAGG TGGTTAAGTC ATTTAAGCGA ACAAGAACAG
CACGTTATTA GGCTTAGATT TGGCTTAGAG GGTAATGAAA GACATACTCT CGCAGAGATA
GGCAGATTGT TACAGGTTTC ACGCGAGAGG GTAAGGCAAG TTGAGCTAAA AGCTTTAAGG
AAATTGAGAA ATCTCACTAG AAAGCTTCCA AGTGGAATTT GA
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| Protein sequence | MVSTAPKPAE SQKRRSSDPI SWYLSSIGRV PLLTPAEEIE LGNQVQTLMS LTEDGQIKEQ
SKEFTSHQRR LIRIGRRAKE RMMKANLRLV VSVAKKYQGK GLELLDLVQE GSLGLERAVE
KFDPTRGYKF STYAFWWIRQ SMTRAIACQS RTIRLPVHLS ERLATIRKVS LDLAHKLGAM
PSRIEIAEAM EIELEELDSI LRQALTTSSL DAPVNGDEGR SFLGDLIADG SGEEPLDKVE
QKIHQEQLGR WLSHLSEQEQ HVIRLRFGLE GNERHTLAEI GRLLQVSRER VRQVELKALR
KLRNLTRKLP SGI
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