Gene NATL1_17081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17081 
SymbolacoA 
ID4781030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1393083 
End bp1394177 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content42% 
IMG OID640084992 
Productpyruvate dehydrogenase E1 alpha subunit 
Protein accessionYP_001015528 
Protein GI124026413 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATGA ACGAAGTCAT GTCTCACAAC CAGGACAAAA CAGGCCAAGA CCCTATTCAG 
CACAGGGAAC ACGCCGACAG GCTAAGCAAT CTTGGCAACA CCAAACCAGC TCAAATCAAT
AGAGAAATTG GTTTAAATCT TTTCAAAGAT ATGACTTTGG GAAGACGATT TGAAGATAAA
TGCGCTGAAA TGTATTACAG AGGGAAGATG TTTGGGTTTG TTCATCTTTA CAACGGGCAA
GAAGCAATAA GTACAGGTGT TATTGGTGCG ATGAAACGCA AACACGACTG GTTTTGCAGT
ACCTACAGAG ATCATGTTCA TGCTTTGAGT GCTGGAGTGC CTGCGAAAGA GGTGATGAGC
GAGCTATTTG GGAAAGAGAC AGGTTGCAGC AAAGGCAGAG GTGGATCTAT GCATCTGTTC
TCTAAAGAAC ATCACCTACT TGGAGGTTAT GCCTTTATTG GTGAAGGTAT TCCAGTTGCC
CTTGGAGCAG CTTTCAGCAG TAAATACAAA AGAGAGGCTC TTAAAGAAAG TAGTGATTCT
GTAACTGCAG CATTTTTTGG AGATGGTACT TGCAATATTG GTCAGTTTTA TGAATGTTTA
AATATGGCCC AGCTATGGAA ATTACCGATC ATATTTGTAG TCGAAAATAA TAAATGGGCT
ATTGGGATGG CCCATGACAG AGCAACTAGT GAGACAGAAA TATGGAGAAA AGCTTCAGCA
TTTGGCATGC ACGGAGAAGA GATTGACGGT ATGGACGTTT TAGCAGTAAG AGGGGCTGCC
GAAAGGGCCC TAGAGCGGGC AAGAGCTGGA GAAGGCCCCA CTTTGATAGA ATGCCTCACT
TACAGATTCA GGGGGCATTC ATTAGCTGAC CCAGACGAGC TTAGATCTGA AAAGGAAAAG
GAATTCTGGG CTAAAAGAGA TCCAATTAAA AAGTTAAAAA ATGATTTAAC TAGTTCTGGC
TTAGTCTCTG ATGAAGAATT AAAAAATATT GAGAAAGAAA TTGATCTAGA AGTTAACGAT
GCTGTTGAAT TTGCTTTAAA CGCCCCAGAG CCTGACCCTA GTGAGTTAAC AAAATATATT
TGGGCAGAAA ACTAA
 
Protein sequence
MNMNEVMSHN QDKTGQDPIQ HREHADRLSN LGNTKPAQIN REIGLNLFKD MTLGRRFEDK 
CAEMYYRGKM FGFVHLYNGQ EAISTGVIGA MKRKHDWFCS TYRDHVHALS AGVPAKEVMS
ELFGKETGCS KGRGGSMHLF SKEHHLLGGY AFIGEGIPVA LGAAFSSKYK REALKESSDS
VTAAFFGDGT CNIGQFYECL NMAQLWKLPI IFVVENNKWA IGMAHDRATS ETEIWRKASA
FGMHGEEIDG MDVLAVRGAA ERALERARAG EGPTLIECLT YRFRGHSLAD PDELRSEKEK
EFWAKRDPIK KLKNDLTSSG LVSDEELKNI EKEIDLEVND AVEFALNAPE PDPSELTKYI
WAEN