| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_16921 |
|---|
| Symbol | ribF |
|---|
| ID | 4779673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 1379431 |
|---|
| End bp | 1380384 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640084976 |
|---|
| Product | putative riboflavin kinase/FAD synthase |
|---|
| Protein accession | YP_001015512 |
|---|
| Protein GI | 124026397 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCATCTA AGCACAAAAA TTGCACGTTT ATCTTGATCC CTCTCTGTGC TCCTGAAAAC
GCAAAACTAC CTACAGCACT AGCCTTAGGT AGTTTTGACG GTCTTCACTT AGGTCATAAA
AAAGTAATAA ATGCCATATT AAAAGAGCCA ATTGGTGTTC CTACAGTTGT CAGTTTTTGG
CCTCACCCAC GTGAGGTTCT CTTTGGAGAA TCAAGATTAA GATTGGATTT ACCAAATGAA
AAAACATTCC TACTTGAGCC TCTAGGAATA GAACAACTAG TTTTGGTTCC TTTTAATAAA
AATCTTGCTT CAAAAAGTGC TGAAACATTT GTAGAAGAAG TTCTAGTAAA AACCCTTCAT
GCTAAACACA TAGCGGTTGG TGAGAATTTT AGATTTGGTC GCAATCGAGA AGGTGACACT
TCTACTTTAA AAAAGATTGG TACCTCTCTA GGGATAAAAA TTTCTATTGT TCCTATCGTT
GAAGACAATC ATGGTCGACT TAGTAGTAGC AGAGTAAGAA AAGCACTCAA CGACGGTGAC
TTGAAGCATG CAAAACACCT ATTGGAGCGT CCTTACACCT TTAGCGGGAC GGTGGAGAAA
GGAAGAGGTT TAGGAAAAAA AATTGGATGG CCAACTGCAA ATTTAAAAAT AGATGGGCGA
AAATTCCTTC CATCATTGGG GGTTTATGCA GCTTGGGCTT CCATAGCAAA CAAAAAAGAA
CGTTTCTTAG CAGTGATGAA TATGGGCCCT CAGCCAACTA TTGATCCAAA CTCCTTATCA
GCAGTAGAAG TTCACCTTTT AGACAAAGAA ATCAATCTAT TAGGACATGA ATTAATTATT
GAACCTGTGC AAAGAATTAG ACTACAAAAA AAGTTTGATA ACATCGAGTC ACTGAGCAAA
CAAATAAGTT CAGATGCAAA ATTGGCAAAA GAAATACTTA CACAAAAGCT TTAA
|
|---|
| Protein sequence | MPSKHKNCTF ILIPLCAPEN AKLPTALALG SFDGLHLGHK KVINAILKEP IGVPTVVSFW
PHPREVLFGE SRLRLDLPNE KTFLLEPLGI EQLVLVPFNK NLASKSAETF VEEVLVKTLH
AKHIAVGENF RFGRNREGDT STLKKIGTSL GIKISIVPIV EDNHGRLSSS RVRKALNDGD
LKHAKHLLER PYTFSGTVEK GRGLGKKIGW PTANLKIDGR KFLPSLGVYA AWASIANKKE
RFLAVMNMGP QPTIDPNSLS AVEVHLLDKE INLLGHELII EPVQRIRLQK KFDNIESLSK
QISSDAKLAK EILTQKL
|
|---|
| |