Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_16901 |
Symbol | surE |
ID | 4779498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1378048 |
End bp | 1378836 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640084974 |
Product | stationary phase survival protein SurE |
Protein accession | YP_001015510 |
Protein GI | 124026395 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.256333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCAT TGAAAATTTT AATTAGTAAT GATGATGGTG TTTTTGCAGA AGGAATAAGA ACACTTGCCA CATCTGCAGC GAGCAGAGGA CATAAAGTTA CTGTTGTTTG TCCAGATCAA GAAAGATCCG CAACTGGTCA TGGATTAACT TTACATTCGC CCATACGCGC TGAAAAGGCA GACGAATTAT TTGGGGGAGG TATTAAAGCT TGGGGATGTA CTGGAACCCC TGCTGATTGC GTAAAACTCG CACTTAATGA ACTTCTTGAT CAAAAGCCAG ACTTAATTCT TTCTGGAATT AATCATGGGC CTAATCTTGG TACGGATATT TTTTGCTCAG GGACTGTTGC TGCTGCTCTT GAGGGGACCT TAGATGGGAT TCCATCTATT GCGGTGAGCG TTGCAAGTTT TCAATGGAAA AATTTTAGTT TCGCTGGGAA ACTTTCCTTA GATATTGCAG AGAAAGCAAT TCAACAAAAT TGGCCCAAGA ACTTACTCCT AAATTTAAAT ATTCCCCCTT GTGAAGAAAA AGAAATGGGT GATTTGGTTT GGACAAGACT TTCAATCAGA CAATACGAAG AACAATTCAT TCGAAGAGTC GATCCAAGAG GTAATACCTA TTTTTGGATG GCTGGGGAAG CAGTAACAGA TCTTCAATCT GCTGGAGAAG GGCCTAAGGG ATGGCCAAGT GATGTCTCTC AAATCGCTAT ATGCTCTCCC TCATTAACGC CAATTCAACC TGATCTTTTT TGGAGAGGAA ATTTAGATGA TTTGCCAAAC TTAATATAA
|
Protein sequence | MKPLKILISN DDGVFAEGIR TLATSAASRG HKVTVVCPDQ ERSATGHGLT LHSPIRAEKA DELFGGGIKA WGCTGTPADC VKLALNELLD QKPDLILSGI NHGPNLGTDI FCSGTVAAAL EGTLDGIPSI AVSVASFQWK NFSFAGKLSL DIAEKAIQQN WPKNLLLNLN IPPCEEKEMG DLVWTRLSIR QYEEQFIRRV DPRGNTYFWM AGEAVTDLQS AGEGPKGWPS DVSQIAICSP SLTPIQPDLF WRGNLDDLPN LI
|
| |