Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_16831 |
Symbol | |
ID | 4780386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1370736 |
End bp | 1372643 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640084967 |
Product | cell division protein FtsH3 |
Protein accession | YP_001015503 |
Protein GI | 124026388 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTAACT TAGGTTTAAT TAAATTTTTG CTAATGCCAA TACGACAGGA CGAAAATCAA CCAAATAAAC GCTTTGGAAT AATTAATTTA GTTTTAATTG GTTTTGGAGC GCTTCTTCTC TTTAGTAGTT TTTTTCCAAG CCAAAATACA CAAGTACCTA GAGTTCCTTA TTCACTTTTC ATAAATCAAG TTGATGATGG AGAAGTTAAA CGTGCATACA TAACACAAGA TCAAATCAGA TACGAACTTT CTACAGTTGA AGAAGGAGCC CCCTCCGTTC TAGCCACGAC TCCCATTTTT GATATGGAGT TACCTCAAAG GCTCGAGAAA AAAGGTGTCG AGTTCGCAGC TGCCCCTCCC AAAAAACCCA ATATATTTAC CACTATTCTT AGCTGGGTTG TACCACCACT AATATTTATT CTTGTATTAC AGTTTTTCGC TCGAAGAAGC ATGGGTGGAG GTGGAGCACA AGGAGCCCTA AGTTTCACAA AAAGTAAAGC TAAAGTTTAT GTCCCTGACG ATGAATCGAA GGTTACTTTC GAGGATGTTG CAGGAGTTGA TGAAGCAAAG AACGAATTAA CTGAAATAGT TGATTTCCTT AAGAAGCCAC AAAGATATAC AGATATTGGT GCAAGAATTC CAAAAGGTGT TTTATTAGTT GGACCACCAG GAACTGGTAA GACTCTTTTG TCTAAGGCTG TAGCAGGTGA AGCAGAAGTT CCTTTCTTTA TCATTTCCGG TTCTGAATTT GTTGAATTAT TCGTTGGTGC TGGTGCGGCG AGAGTTAGAG ATTTATTTGA ACAAGCTAAG AAAAAAGCTC CGTGCATAAT TTTTATCGAT GAATTAGATG CTATTGGTAA AAGTAGATCT GGATCAATGG GAGTAGTTGG AGGTAATGAT GAAAGAGAGC AAACTCTTAA TCAACTACTT ACAGAAATGG ATGGGTTTTC TTCAGCTGAC AAGCCAGTAA TTGTTCTTGC GGCAACAAAC CAACCCGAAG TACTTGATGC GGCGTTATTA CGTCCGGGTA GATTTGATAG ACAAGTTCTT GTGGATAGAC CTGATTTATC TGGTAGGAAA ACTATTTTAG AAATTTACAC AAAGAAAGTA AAACTCTCGG CAAAAATAGA TCTTGATAGA ATTGCTCAAG CTACAAGCGG ATTTGCAGGC GCCGATTTAG CAAACATGGT AAATGAAGCG GCTCTTTTAG CGGCAAGAGC CTACCGCCCA GAAGTCGAGC AGCAAGATTT AAATGAAGCC ATTGAAAGAG TTGTCGCTGG GCTTGAGAAA AAAAGCAGAG TCTTGCAAGA TGATGAGAAA AAGATTGTTG CTTATCACGA GGTTGGCCAC GCAATAGTGG GACACTTAAT GCCTGGTGGA AGCAAAGTGG CAAAAATTTC AATAGTACCA AGAGGTATGA GCGCTTTAGG CTATACTCTT CAACTCCCAA CAGAAGAAAG ATTCCTAAAT TCCAAAGAAG AACTACAAGG TCAAATCGCT ACTCTTCTTG GGGGAAGATC TGCAGAGGAG ATAATTTTCG GAAAAGTTAC TACAGGTGCT TCAAACGACT TGCAAAGAGC AACAGATATT GCTGAGCAAA TGGTAGGTAC ATATGGAATG AGCGATATCC TAGGTCCATT GGCATATGAC AAACAAGGAG GGGGTCAATT CCTTGGAGGG AACAATAATC CTAGAAGAGA ATTAAGTGAT GCTACTGCTC AAGCAATTGA TAAAGAAGTC AGAAGTTTGG TAGATGATGC ACATGAAAAA GCTCTAAATA TCCTTAAAAA TAATCTTTCA TTACTTGAAG ATATTTCTCA AAAAATCCTT GAGAAAGAAG TTATAGAAGG AGATGATCTA ATTAAAATGC TATCAACCAG TGTTATGCCT GAAAAAGTTT CTAATTAA
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Protein sequence | MFNLGLIKFL LMPIRQDENQ PNKRFGIINL VLIGFGALLL FSSFFPSQNT QVPRVPYSLF INQVDDGEVK RAYITQDQIR YELSTVEEGA PSVLATTPIF DMELPQRLEK KGVEFAAAPP KKPNIFTTIL SWVVPPLIFI LVLQFFARRS MGGGGAQGAL SFTKSKAKVY VPDDESKVTF EDVAGVDEAK NELTEIVDFL KKPQRYTDIG ARIPKGVLLV GPPGTGKTLL SKAVAGEAEV PFFIISGSEF VELFVGAGAA RVRDLFEQAK KKAPCIIFID ELDAIGKSRS GSMGVVGGND EREQTLNQLL TEMDGFSSAD KPVIVLAATN QPEVLDAALL RPGRFDRQVL VDRPDLSGRK TILEIYTKKV KLSAKIDLDR IAQATSGFAG ADLANMVNEA ALLAARAYRP EVEQQDLNEA IERVVAGLEK KSRVLQDDEK KIVAYHEVGH AIVGHLMPGG SKVAKISIVP RGMSALGYTL QLPTEERFLN SKEELQGQIA TLLGGRSAEE IIFGKVTTGA SNDLQRATDI AEQMVGTYGM SDILGPLAYD KQGGGQFLGG NNNPRRELSD ATAQAIDKEV RSLVDDAHEK ALNILKNNLS LLEDISQKIL EKEVIEGDDL IKMLSTSVMP EKVSN
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