| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_16511 |
|---|
| Symbol | |
|---|
| ID | 4780142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1343984 |
|---|
| End bp | 1345822 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640084934 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_001015473 |
|---|
| Protein GI | 124026357 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.760538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.297105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAGCT TCACTAAACC TTTTTATCCA ACTTCAATAC AAAGAAGACG TGGTCTTCTT
TGTATTTTAT TTATTGGATT AATAATTTTT GTTTGGCAAT TAGGGACAAC AGGTTTAGTT
GATGAAACAC CACCTTTGTT TGCTGCAGCC AGTCGAGCAA TGGCTGAAAC GGGTAATTGG
TTTACTCCTC AAGTAAATGG ATTACCTCGA TTTGACAAGC CTCCTTTGGT TTATTGGTTG
ATGGGACTGG GATTTTCAAT CCCAGGGAAT ATTTCTTGGG ACCCTTTAGG GACATGGGCT
GCAAGGCTTC CTTCTGCATT ATCAACAATT TTTTTAATGC TCGTTTTAGG GGACACAATG
ATGAAATATC CCCAAGAAGA AAATAATTTC AATAGAAGAA CCGCAGTTAT TACTGCGCTG
GTATTTGCGT TGTCGCCTTT GGTAATAATT TGGGGAAGAA TTGCTGTAAG TGATGCACTC
CTTTGCAGCA CTTTAGGAAT TTGCTTACTT CTTAAATGGA GAAGATTCGC TAATCCAGAG
GGAGAAGCTT GGTGGTTGTC TTGGATTTTT TTGTCATTTG CAGTTTTAAC TAAAGGTCCT
GTCGCTTTGG TTTTATCAGC ATTAACAATT TTATTTTTTT CCTTATTTCA AAATAATTTG
CTCGGAATTT TAAAAATATT GAAAGTAATT CCAGGACTTT TTCTTGTTTT TATTATTAGT
TTTCCTTGGT ATTTAATTGA ATTATTAATA GAGGGAAAAC CCTTCTTAGA TAGTTTTTTT
GGGTATCATA ATCTTCAAAG ATTCACCTCA GTAGTAAATT CTCATGGGGA GCCTTGGTGG
TTTTTTTTAA TAGTATTATG TATTGCTTCT TTACCACTTA CTCCATTTTT ATTAATAAGT
ATTTGGAAGA ATTTTTACAA TGTATCTAAA TGGTCTAGAA GAGTTATTAA AAAACCAGAA
AAGTCATTAT TTGAGTTTTC ATTTTTTTGG TTAATAGCTG TATTTGTTTT CTTTACTATT
TCAGCTACCA AGCTACCGAG CTATTGGCTT CCTGCTACAC CTGCAGCATC AGTTTTAATA
TCACTTTCCT TAACCAATAA TGTTAAAGAG GAATTCTTAA AATCTTTGGC TTGGAAATTT
ACAATATTTT TATCAATACT CTTTTCCATA TTTCTCTTCT CTTCAAAGCT ATGGATTCAG
CTTCTTAACG ATCCTGAGAT TCCAAACTTC TCAGAAGAAT TAACCAATAG CTTTTTAATT
GAAAAGTCTG GTTTTATTTT TCTTTTACTT GCTGTTCTAG GAATAATATT TTCCTCTAGA
AAAATATATG GAAAACTATT GATTTTGCAA ATCCCTATAG CTTTATCTCA TTTCCTGATT
GTGTTACCAA CTTTTGATTT GGCAGATAGA TTAAGACAAC TCCCCTTAAG AGAAGCCTCA
GAATTACTTT TAAATTCCCA AAATAGAAAC GAGCCTTTAG TAATGGTAGG AGCTATGAAA
CCCTCAATTC ATTTTTATAC TAATCAAGTC ATTGTTTTTG AAGGTAGATC TAAAAATGCT
TTTGTAAATG TTTCAGATCG ACTTAAAAAC GAGAAGAGAA GAGGCTGGAA AGGAAGGCCA
ATATATGGAT CCAATGGCTC AGAAACTACA CTTTTACTTA TTGATAAAAG ATCAGTGGAA
AAATCTTATT GGCAAGGACT TAATCCAGAA GTCTTAGGTA ATTTTGGTGT TTATAGCGTT
TGGAGACTTG ATAGAGAAAT TATTGAAAGA CGAGCTAAAT TGTTGAAAAT AGATGGTGTC
ACTTCTACTT GGAAAAATCC TAGACCAGAG AGATTTTAA
|
|---|
| Protein sequence | MKSFTKPFYP TSIQRRRGLL CILFIGLIIF VWQLGTTGLV DETPPLFAAA SRAMAETGNW
FTPQVNGLPR FDKPPLVYWL MGLGFSIPGN ISWDPLGTWA ARLPSALSTI FLMLVLGDTM
MKYPQEENNF NRRTAVITAL VFALSPLVII WGRIAVSDAL LCSTLGICLL LKWRRFANPE
GEAWWLSWIF LSFAVLTKGP VALVLSALTI LFFSLFQNNL LGILKILKVI PGLFLVFIIS
FPWYLIELLI EGKPFLDSFF GYHNLQRFTS VVNSHGEPWW FFLIVLCIAS LPLTPFLLIS
IWKNFYNVSK WSRRVIKKPE KSLFEFSFFW LIAVFVFFTI SATKLPSYWL PATPAASVLI
SLSLTNNVKE EFLKSLAWKF TIFLSILFSI FLFSSKLWIQ LLNDPEIPNF SEELTNSFLI
EKSGFIFLLL AVLGIIFSSR KIYGKLLILQ IPIALSHFLI VLPTFDLADR LRQLPLREAS
ELLLNSQNRN EPLVMVGAMK PSIHFYTNQV IVFEGRSKNA FVNVSDRLKN EKRRGWKGRP
IYGSNGSETT LLLIDKRSVE KSYWQGLNPE VLGNFGVYSV WRLDREIIER RAKLLKIDGV
TSTWKNPRPE RF
|
|---|
| |