Gene NATL1_16121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_16121 
SymbolcobQ 
ID4780565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1317516 
End bp1319000 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content34% 
IMG OID640084894 
Productcobyric acid synthase 
Protein accessionYP_001015434 
Protein GI124026318 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTAG GAACCTCAAG TGGCGCAGGT AAAACACTCA TAGCTACTGC TATTTGTCGA 
TGCTTAAGAA GGAAAGGGGA ACAGCCAATA CCTTTTAAGG GCCAAAACAT GAGCAATAAC
GCTTGGGTTG ATACCCAGGG AAGAGAAATG GCATATTCTC AAGCCCTTCA ATCTTGGTCT
GCAGGCTTAG AGCCAAGTGC TGAAATGAAT CCTGTACTTC TAAAGCCAAA AGGGGATTGC
ACAAGTGAAG TAATTCATCT AGGCAAAAGT GTCGGCACTA GCAAAGCGAT CAATTATTAC
GAAGACTGGT TTGATTCAGG GTGGGAAGCT ATTAAAAAAG GCCTAGCAAT ATTATTAAAG
AGTAAAATCG ACGGAAGACT GATTCTTGAA GGGGCCGGAA GCCCAGTAGA AGTGAATTTG
CAACATAAAG ATCTTACAAA TTTGAAATTA GCAAAATTTC TAAATGCAAA TTGTATTTTA
GTAGCAGATA TTGAAAGGGG AGGAGTTTTT GCTCAAATCA TTGGAACAAT TGCATTGATG
AAACCTGATG AAAAAAAATT AATTAAAGGA ATAATTATTA ATAGATTCAG AGGCGATAAA
GCCTTATTCG AATCAGGAGT CACATGGATA GAAAAAGAAA CAGGAATCCC AGTTTTAGGA
ATATTACCGT GGCTAAAAGA GATTTTTCCA CCTGAAGATT CCCTTGACTT ACTTGAAAGG
AAACAAGTAA ATAAAAGTGC AGAAATAGAA ATAGCAATAA TAAAATTACC TAGGATTAGC
AATTTTTCTG ATTTAGATCC TTTCTTTAGC GATTCAAGTA TTCAAATGCG ATGGATAGAA
CCCGGACAAG ACCTAGGTAA TCCAGATGTA TTAATAATTC CTGGAAGCAA ACAAACAATT
AAAGATTTAG AAAGTCTAAA TAAAACTGGT TTGAGCAATC AAATAAAAAA TTATGCAAAA
AAAGGGGGAA ATATTTTTGG CATATGTGGA GGGTTACAAA TGCTAGGAAA AACATTGGAA
GACCCTCACA AGCAAGAAAG TATCAAGGAG CAAAATACAT TTTCAAATAT GGGGATGAAT
CTTCTTCCAA TCAAAACAAC TTTTGGAGAA ATCAAGCACA CCTCACAAAG AGAAGAAAAA
GTTTCATGGC CAGTTTCTCA GAGTCTAAAG GGGTTTGAAA TGCATTATGG GGAAAGTGAT
TTGATCAATA ATACAGATTC CGAAATTATT TCTCTATTTA AAAACAGTTC TTTAGGGTGG
GTAATAGAAA AAAAAGATAA AAGCTTTGTT GGGGGAACTT ATTTACATGG AATTTTTGAA
AATGATGAAT GGCGAAGGCA ATGGATCAAT AAAATAAGAC AGAAAAAGGG ATTAAATCAT
TTAAAAATTG ATAAAGAAAA CAATAATGAT AAAAGAGAAA GATTATTAGA TTTATTAACT
GATGCCTTCG AAAAAAATAT AAATATAGAT ATTTTAATCA AATAA
 
Protein sequence
MVLGTSSGAG KTLIATAICR CLRRKGEQPI PFKGQNMSNN AWVDTQGREM AYSQALQSWS 
AGLEPSAEMN PVLLKPKGDC TSEVIHLGKS VGTSKAINYY EDWFDSGWEA IKKGLAILLK
SKIDGRLILE GAGSPVEVNL QHKDLTNLKL AKFLNANCIL VADIERGGVF AQIIGTIALM
KPDEKKLIKG IIINRFRGDK ALFESGVTWI EKETGIPVLG ILPWLKEIFP PEDSLDLLER
KQVNKSAEIE IAIIKLPRIS NFSDLDPFFS DSSIQMRWIE PGQDLGNPDV LIIPGSKQTI
KDLESLNKTG LSNQIKNYAK KGGNIFGICG GLQMLGKTLE DPHKQESIKE QNTFSNMGMN
LLPIKTTFGE IKHTSQREEK VSWPVSQSLK GFEMHYGESD LINNTDSEII SLFKNSSLGW
VIEKKDKSFV GGTYLHGIFE NDEWRRQWIN KIRQKKGLNH LKIDKENNND KRERLLDLLT
DAFEKNINID ILIK