Gene NATL1_16061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_16061 
Symbol 
ID4780564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1313113 
End bp1313688 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content36% 
IMG OID640084888 
Productphotosystem I assembly protein Ycf4 
Protein accessionYP_001015428 
Protein GI124026312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.505806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTG AATCAAAGTC AAGCCAATCA GAAAAAGAGC TATCTGGTTT GGTTTTAGAA 
CAGAAAATTA AAGGTTCGCG TAAGGTTTCG AACTATCTTG TTGCTTCGAT GCTAAGTATC
GGAGGTGTTG GATTTTTATT GGCTTCATTC TCTAGTTATT TTGGAAGAGA TTTTTTACCA
CTAGGAAACC CTTCGACCCT GATTTTTGTT CCTCAGGGCC TGGTTATGGG GCTATACGGT
TTAGCGGCTT TCTTGCTGGC TATTTATTTT TGGAGACTAA TAAATATTGA TTATGGTTCT
GGCGTAAATA GATTTGATAA AAATAAAGGA GTTTTATCTT TATCTCGGAG AGGTTTATTC
AAAAATATAG AAATAGAAAT CCCCATTGAT GAGATTAAAG CTGTGAAATT AGAGGTAAGA
GAGGGTTTTA ATCCACTAAG AAGAGTATCT TTGAGGATTA AAGGTAGGAA GGATTTACCT
ATATCTCGAG TTGGATCTCC TAAGCCATTA TTGGATTTAG AGAATGAGGG GGCTGAAATT
GCGAGATTTT TAGAGGTTAA CCTTGAAGGG ATTTAA
 
Protein sequence
MSSESKSSQS EKELSGLVLE QKIKGSRKVS NYLVASMLSI GGVGFLLASF SSYFGRDFLP 
LGNPSTLIFV PQGLVMGLYG LAAFLLAIYF WRLINIDYGS GVNRFDKNKG VLSLSRRGLF
KNIEIEIPID EIKAVKLEVR EGFNPLRRVS LRIKGRKDLP ISRVGSPKPL LDLENEGAEI
ARFLEVNLEG I