Gene NATL1_16041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_16041 
SymbolilvH 
ID4780024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1311896 
End bp1312399 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content38% 
IMG OID640084886 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_001015426 
Protein GI124026310 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA CACTTTCAGT TTTAGTTGAA GATGAATCTG GAGCACTAAG CAGGATTGCA 
GGCCTTTTTG CAAGAAGAGG ATTTAATATT GATAGCTTGG CTGTTGGTCC TGCAGAAGCA
AAAGGGATAT CTAGACTAAC AATGGTCGTT CAAGGAGACG AATCGACGCT TCAACAAATG
ACCAAACAAC TAAACAAATT AATCAATGTT TTAGAAGTTC TCGATTTGAC AACTTTACCA
GCTGTAGAGA GAGAGTTGAT GCTCTTGAAA GTCTCTGCAT CATCTGAAAA CAGAGGTAAA
ATATTAGATC TTGTTCAAGT TTTCAGAGCA AAAGTTGTAG ATGTTTCGGA TAGTGCTTTG
ACACTTGAAG TTGTTGGTGA TCCAGGCAAA CTTGTTGCTC TGGAAAATTT ATTGAAGCCT
TATGGAATTT TAGAAATTGC TCGGACAGGG AAAGTTGCTC TTAAGAGGGC CTCAGGAGTA
AATACAGAAA TGTTAAAAAC CTAA
 
Protein sequence
MKHTLSVLVE DESGALSRIA GLFARRGFNI DSLAVGPAEA KGISRLTMVV QGDESTLQQM 
TKQLNKLINV LEVLDLTTLP AVERELMLLK VSASSENRGK ILDLVQVFRA KVVDVSDSAL
TLEVVGDPGK LVALENLLKP YGILEIARTG KVALKRASGV NTEMLKT