Gene NATL1_16011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_16011 
Symbol 
ID4779708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1309659 
End bp1310633 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content37% 
IMG OID640084883 
Productputative chaperon-like protein for quinone binding in photosystem II 
Protein accessionYP_001015423 
Protein GI124026307 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.975575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAA CTATGCAAGT TCTGGTGATT GGTGGCACAG GAACTCTTGG TCGCCAAATA 
GCCAAAAACG CCATAGATGC AGGGCATAAA GTGCGCTGCA TGGTTAGAAA ACCAAAAGCT
GCTTCATTCC TTCAGGAGTG GGGATGTGAG TTGACTCGTG GCAATTTATT AAATAAAGAA
GATATTGAAT ATGCACTTGA TGGCATTGAT GCTGTTATTG ATGCAGCAAC AAGTAGACCT
GATGATCCAC GCAGCGTCTA CGAAACTGAT TGGGATGGAA AATTAAATCT ATTTAACGCT
TGTGAAGAAA AAAATGTAAA AAGAGTAATC TTTTTATCTT TGTTAGCGGC AGAAAAATAT
AGAGAAATTC CATTAATGGA TATCAAATAC TGTACTGAAG AATTGTTGGT TAGTTCTTCT
TTGGACTACA CCATTTTGCA AGGTGTTGCT TTCATGCAAG GAGCCATAGG TCAATTCGCT
ATTCCTATCT TGAATAATGA ACCAGTTTGG ATAAGTGGAA ATCCTACAGA TATTGCTTAT
ATGAATACAC AGGATATTGC TCGATTTGCT GTTGCAGCCT TAGATAGGCC TCAAACCATA
AAAGGAAGAT TTCCAATAGT TGGACCGAAA GCATGGAGTG CTAAAGGCTT AGTTGATTTA
TGTGAAAAGT TCAGTGAAAA AAGAGCAAGA GTATTAAAAG TTTCCCCAAC AATAATTTCT
ATTGCTCAAT CAGTTGTATC GTTTTTCGAA CCAACGTTGA ATGTTGCAGA GAGGCTATCT
TTCTCTGAAT TGAGCGGTAG TGGAGGAAAG TTGGATGCTC CGATGGAAGA TACTTATACT
GCTTTTGGTT TGAATCCAGC CGATACAACA ACAATGGAGG GTTATATAAA AGAGTATTAT
GGAGTCATAT TGAAAAGGCT TAAAGATATA GGAGTTGATC TTGATATTGA AGAGAAAAAG
AAATTCCCAA TTTAA
 
Protein sequence
MNSTMQVLVI GGTGTLGRQI AKNAIDAGHK VRCMVRKPKA ASFLQEWGCE LTRGNLLNKE 
DIEYALDGID AVIDAATSRP DDPRSVYETD WDGKLNLFNA CEEKNVKRVI FLSLLAAEKY
REIPLMDIKY CTEELLVSSS LDYTILQGVA FMQGAIGQFA IPILNNEPVW ISGNPTDIAY
MNTQDIARFA VAALDRPQTI KGRFPIVGPK AWSAKGLVDL CEKFSEKRAR VLKVSPTIIS
IAQSVVSFFE PTLNVAERLS FSELSGSGGK LDAPMEDTYT AFGLNPADTT TMEGYIKEYY
GVILKRLKDI GVDLDIEEKK KFPI