Gene NATL1_15921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_15921 
Symbol 
ID4781039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1302418 
End bp1303518 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content34% 
IMG OID640084874 
Productputative hydrolase of the alpha/beta-hydrolase fold 
Protein accessionYP_001015414 
Protein GI124026298 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.292045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAGCAA AGGATAATTT GAAAAGAGAG GAGTTACTTT CAGACTTAGG ACTACAACCA 
TTTAAGGAGC GCATTCCATG GATTGGTCCT GATCTTCAGA CACTTAGAGA TACCTTCTCT
TCAGATGAAT TGCCTGATGC CAATTCATCT GAAATTCGTA TAAATGTCCC ACCTCTTAAG
AGTAGAAAAA CAGGGGGTGG ATCATTAGTT GCATACTTGG ATAAACCACC TATTACTTCT
AGTCTTAATG GTTTAGTTCT TCTTCTGCAT GGACTGGGAG GCTCTTCTCG CAGAAGAGGC
TTGACTAGGA TGGCCAGTGC TTTGGTGCAG TCAAATTTTG CTGTTTTGAA ACTTAATTTG
AGAGGTTCAG ATCCTTGTAG GAATTATGTC GATGGTACCT ATGCTGCAGA GTGCAATAGT
GATTTGATTC CTGTTTTAAG ACGTGCGAGA GAGATTTCAT TTCAATTAAC TAATGAGTAT
AGATGTGTAA AAAATATTCC TCTTTTTGGA GCGGGTATCT CTTTGGGTGG AACTATTCTT
TTAAATGCTT GTATGGGTAA TGAATCTTTG TTGGATGGAT TGGTATGTAT TAGTAGTCCT
TTGGATTTAC ACGAATGTAG TTCTTCTATT GAAAGACCGA GAAATTTTAT TTATCAAAAA
TGGTTGTTAA ATCGTTTGAT TAGGCAAACT TTAGAAGATC CTTTTGGGAT AGAAGAAATA
GAAAGAAATG CTTTAGTAAT AAATAAAAAA GATAAAAAAA GAAAAATAAA TGATATTAGA
TCTTTTGATA ATTTTATAAC TGCTCCTAGA TGGGGATATA AAAACGTTGA GGAATATTAT
GCGAACGCAT CTCCTTTTTT CTCTCTTATT AAGAATGAAA AATCTCTTCC AAAAACATTA
TTTATTCAAT CTAAAGATGA TCCTTGGGTT CCTTTTTTAG CTGCTGAAAA ACTAATGGAA
AAAATGAAAT TTTCGAATGA TCAAAAAATC AATCAATTTA TTTTTACGGA GAAAGGCGGA
CACAATGGAT TTCATGGCAA TGAAGGATGC TGGGGGGATC AAGTTGTTTG TAAGTGGTTT
TTATCTTTGA AAACTATTTA A
 
Protein sequence
MVAKDNLKRE ELLSDLGLQP FKERIPWIGP DLQTLRDTFS SDELPDANSS EIRINVPPLK 
SRKTGGGSLV AYLDKPPITS SLNGLVLLLH GLGGSSRRRG LTRMASALVQ SNFAVLKLNL
RGSDPCRNYV DGTYAAECNS DLIPVLRRAR EISFQLTNEY RCVKNIPLFG AGISLGGTIL
LNACMGNESL LDGLVCISSP LDLHECSSSI ERPRNFIYQK WLLNRLIRQT LEDPFGIEEI
ERNALVINKK DKKRKINDIR SFDNFITAPR WGYKNVEEYY ANASPFFSLI KNEKSLPKTL
FIQSKDDPWV PFLAAEKLME KMKFSNDQKI NQFIFTEKGG HNGFHGNEGC WGDQVVCKWF
LSLKTI