Gene NATL1_15891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_15891 
SymbolcysS 
ID4779352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1298261 
End bp1299763 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content31% 
IMG OID640084871 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001015411 
Protein GI124026295 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.854558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCTAA AATTCACAAA CACCTTATCC AAAAAGAAAG AGGATTTTAT TTCTATAAAT 
CCTAATCAAG TTAAAATATA TTGTTGTGGT GTAACTGTTT ATGATCTTTG TCATCTTGGT
CATGCAAGAA GTTACCTGAA TTGGGATGTA TTGAGACGGT TTTTAATTTG GAAAGGATTT
GAAGTTAAAT TTGTACAAAA CTTCACTGAT ATTGATGACA AAATTATTAA TCGAGCAAAT
AAAGAAGGAT GTTCTACTGA TGAATTAAGT GAAAGAAATA TTGATGAATT CCACAAAGAT
ATGGATACTC TTTCCATTCT TAGACCAACT AGCATGCCAA GAGCAACAAA ATGCCTCCAT
CAAATTATTA ATTTCATAGA AGAATTAGAA CAAAAAAAAG TAGCTTATTC ATCAAATGGT
GATGTTTATT TTTCAGTAAA TAAACATAAA AATTATGGGA AACTTAGTGG AAGAGAAATT
GAGAATCAGA TAGATAATGC AGCAGGTAGA TTAAAAACAA ATCAAAAAGA AAGTAAAAAG
AACTCGCTTG ATTTTGCTCT CTGGAAAAAG TCCAACTCAG GTGAGGTTAG TTACTCTTCG
CCTTGGGGAA ACGGCAGGCC AGGTTGGCAT ATTGAGTGTT CAGCAATGGT TAAACAAGAA
TTAGGAGAAA GTATTGATAT TCACCTTGGT GGATCAGACC TAATATTTCC TCATCATGAG
AATGAAATAG CTCAATCTGA AGCCTGTAAT GGGAAAGAGT TAGCAAAATA CTGGCTTCAC
AATGGAATGG TTAATGTGGG AGGTGAAAAG ATGAGTAAAT CACTAGGGAA TTTTACAACC
ATTAGGTCTT TATTAGAGGA AGGTATTTCA CCTATGACTT TGAGATTTTT TGTATTACAA
ACTAATTACC GAAAGCCCCT AGATTTTACT CAAGAAGCAC TAAAAGCTGC TTCAAAAGGG
TGGGAAAGAT TAAATAATTG CCTGTCTTTT GGTTATATTT ATAAAATTAA AGATCAAGCT
AAAAACGAAA TCATCCTAGA TAAACCGATA AAAAAATCTG CCAACACTAA TCTTGATAAA
GAATCATTTA AATTATTATC AGACTTTGAA AGGTATATGG ATGACGACCT AAATACATCT
GGAGCTTTAT CTATTCTTTT TGAACTATCT CAACCAATTA GAAAGATCAT TAACTTCTTA
AAAGAAAAAG ATATTAATGA AGTTGATCAA GATGAATTAA ATCAAGTTTT TTATAAATGG
GAACTACTCT CTGAGTTAGC AGCAGTTCTA GGTTTAAAAG TAAATTTAAA TCATGAAAAC
CCAAAAAACA ATCCTGAACT TGACACTAAT AAGATTGAAG AACTTATCAA GAAGAGATCC
TTAGCAAAAG CTAATAAAGA CTTTTTACTC GCTGATAAGA TAAGAGATGA TTTTAAAAAT
ATTGGAATTG ATTTAATTGA TAAACCTAAA GGGGTTACTG AATGGAAACA ACTTTCAGAT
TAA
 
Protein sequence
MSLKFTNTLS KKKEDFISIN PNQVKIYCCG VTVYDLCHLG HARSYLNWDV LRRFLIWKGF 
EVKFVQNFTD IDDKIINRAN KEGCSTDELS ERNIDEFHKD MDTLSILRPT SMPRATKCLH
QIINFIEELE QKKVAYSSNG DVYFSVNKHK NYGKLSGREI ENQIDNAAGR LKTNQKESKK
NSLDFALWKK SNSGEVSYSS PWGNGRPGWH IECSAMVKQE LGESIDIHLG GSDLIFPHHE
NEIAQSEACN GKELAKYWLH NGMVNVGGEK MSKSLGNFTT IRSLLEEGIS PMTLRFFVLQ
TNYRKPLDFT QEALKAASKG WERLNNCLSF GYIYKIKDQA KNEIILDKPI KKSANTNLDK
ESFKLLSDFE RYMDDDLNTS GALSILFELS QPIRKIINFL KEKDINEVDQ DELNQVFYKW
ELLSELAAVL GLKVNLNHEN PKNNPELDTN KIEELIKKRS LAKANKDFLL ADKIRDDFKN
IGIDLIDKPK GVTEWKQLSD