Gene NATL1_15871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_15871 
SymbolacrA 
ID4779526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1294157 
End bp1295230 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content38% 
IMG OID640084869 
Productmembrane fusion protein 
Protein accessionYP_001015409 
Protein GI124026293 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGGA AAAACTTAAA AAAGAAAAAA GTTATAGGCC TTATTGCACT TTCGGCCTTA 
AGTGTTGGTG GAATTAGTTT TAAACTTTCA CAAGATAATG CATCGAATAA AGACATAACT
GAATTTACAA TTGCTGCTGA AAGCGGCAGT TTGCCTGGTT TGATAACAGC AAGTGGTGAA
TTAAAAGCAA ATAAAAGCGT AAATGTAAGC CCAAAAAGAC AAGGAATACT TAACGAAATT
TTCGTGGAGG AAGGAGATCA GGTTAAGAAA GGTGATCTAA TTGCGAAAAT GGATTTTGGA
GACTTGGAAT TTAGAATTGA AGAGATAAAA GCTAATTATG AGACTCAAAA AGCAAGCTTT
AAAAGAAGGG AGATGCTTTT TAATGAAGGA GCCATAAGTG CTGAAGAGTA TGAAGAATAT
AAAAATAGAT TTTTAAAAAG CAAAGCCAGA TTCAAACAAA TAGAAGTCGA AGAGAATGAG
ACAAGCATTA GAGCACCATT TAGAGGAGTA ATAACCAGCA GATACGCAGT CCCAGGGGCA
TTCGTAACTC CTACGACCTC TGCATCTTCC TCAAGAGAGG GTGGGGCTAC AAGTTCATCA
ATCGTCAAGC TTTCCCAAGG TCTTGAAATA GTTGCGAAAG TTCCTGAGAG TGATATTGGA
AGAATCAAAA CAGGTCAGGA AGCAAGTATC AGAGTAGATG CTTTTCCTGA TAAGCGTTTT
AAAGCAGTTG TCTCCAAAAT CTCTCCAAGT GCAATCAAGA ACAACAACGT AACTTCCTTT
GAAGTTACGT TGTTGTTGGA GAATAGACCT CAAGATTTAC GCCTTGGCAT GACATCTGAT
ATCAACTTTC AAACTGGAGC GACCAAAATC AGCACGCTTA TTCCAACAGT AGCAATTGTC
ACAGAAGAAG GGAGAACTGG AGTTCTAATA GTCGGGAATA AGAATCAACC AGAGTTTAAA
AAAGTTGAAT TAGGTACAAG CAGTGGCAGT AAGACTGCCA TAATATCTGG GTTAGAACCT
GGGGAGAAAG TTTTTATTGA TCTTCCTTCT TGGGCAAAAA AAAGAGAGCG TTAA
 
Protein sequence
MIWKNLKKKK VIGLIALSAL SVGGISFKLS QDNASNKDIT EFTIAAESGS LPGLITASGE 
LKANKSVNVS PKRQGILNEI FVEEGDQVKK GDLIAKMDFG DLEFRIEEIK ANYETQKASF
KRREMLFNEG AISAEEYEEY KNRFLKSKAR FKQIEVEENE TSIRAPFRGV ITSRYAVPGA
FVTPTTSASS SREGGATSSS IVKLSQGLEI VAKVPESDIG RIKTGQEASI RVDAFPDKRF
KAVVSKISPS AIKNNNVTSF EVTLLLENRP QDLRLGMTSD INFQTGATKI STLIPTVAIV
TEEGRTGVLI VGNKNQPEFK KVELGTSSGS KTAIISGLEP GEKVFIDLPS WAKKRER