| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_15411 |
|---|
| Symbol | |
|---|
| ID | 4779651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 1255457 |
|---|
| End bp | 1256695 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640084823 |
|---|
| Product | major facilitator superfamily multidrug-efflux transporter |
|---|
| Protein accession | YP_001015363 |
|---|
| Protein GI | 124026247 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.37944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.866892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGT TCTCAACTTC TATTGTTAGC AATTATTGGG AGAAATTCCC TGTATCCCTA
AGACTAATCA TAAAAGCTCG TTTATGGACA GCAATAGGAG CAGGAGGGGT ATTGTATTTA
AGTCCGATAA TATTCAATAG TTTAGGTTTT TCAGCAGAGC AAATCGGAAG AGGAATAACC
ACAGCGGCAT TTGCTGGAAT AACGACAAGA TTTGGGACGG GATATTTACT TGACAAAAAA
TTTAGCTCTA TAAAAGCAAT TAAAGTTGCA TGTTTATTTG CAATTTTATC GGATTTTATA
CTTTTTTATT CGCAAAATTT CTTAGCTTTC CTTTGTGGTC AGTTTTTCTT AGGAGCTGCA
GCTGGAATAT ATTGGCCTTC TGCGGAATTA GCTATTCCAT CAAATTGCAA TACCAAAATA
AAATCAAGTG AAGGTTATTC TCTTGCAAGA AGTGCTGATG CAATTGGAGT CACATTAGGG
GTCTTACTTG GTACTATAGG ATCTTATTTT GAATTCCCAA GAATAATATA TTTAATAGAT
ATTTTATGCA TGTTATATAT ATTAAATATA TTATTAAATA AGCTAGACAA AAGTAGAAAC
AAAATTGCTT TCAAGATCAA AGGCGATTTA GATGTTAAAT ATAAATCTCT TGAAAAAAAA
TACAATCTGA AATGGATAAT AAGTTTACTA CCTTTATTAT TAATAACTCT ATTTGTAACA
GGGATAATGA GTTTATTACA AAGCATCCTT CCTATAGATT TAGCGAACGG AGGGATAATA
AGGCCACCAT TCACAGACCA AAAAGTAGCT ACATTATTAA CAATTAAACT CATTTTACTT
GCTTTTTTTC AATGGCCAGT GGGTTATATT TTAAGAAATA AAAATTCACC TTTTAAATTC
AGATTATGCT TAATATCTCT ACTCATAGGT TTTATTTTTT TGTCACTTTC AAATTTCTTA
CTTGATGGAT ATCTATTAAT ACTTATAGCT TTCATACCAC TAACAATATC TCTATGTATA
TTTTTACCCT CTGCTTCAGA TGCAATTATA AATTCTGCTC CCATTAAATA TCAAGGTTCA
GCCATAGCAT TATATTCACA ATGTTTTGGC ATTAGTTCTT TAACAGTACC TTGGATGGCG
GGAAAATTAA TTGACACTTA TGATACAGCC CTTCAACTAT GGTTAATTGT TAGTATTCTT
TGTATACTTT TAGTACCAAT ATCTAAGAAT ATTAAATAA
|
|---|
| Protein sequence | MNLFSTSIVS NYWEKFPVSL RLIIKARLWT AIGAGGVLYL SPIIFNSLGF SAEQIGRGIT
TAAFAGITTR FGTGYLLDKK FSSIKAIKVA CLFAILSDFI LFYSQNFLAF LCGQFFLGAA
AGIYWPSAEL AIPSNCNTKI KSSEGYSLAR SADAIGVTLG VLLGTIGSYF EFPRIIYLID
ILCMLYILNI LLNKLDKSRN KIAFKIKGDL DVKYKSLEKK YNLKWIISLL PLLLITLFVT
GIMSLLQSIL PIDLANGGII RPPFTDQKVA TLLTIKLILL AFFQWPVGYI LRNKNSPFKF
RLCLISLLIG FIFLSLSNFL LDGYLLILIA FIPLTISLCI FLPSASDAII NSAPIKYQGS
AIALYSQCFG ISSLTVPWMA GKLIDTYDTA LQLWLIVSIL CILLVPISKN IK
|
|---|
| |