| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_15301 |
|---|
| Symbol | lasT |
|---|
| ID | 4780969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 1244915 |
|---|
| End bp | 1245652 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640084812 |
|---|
| Product | tRNA/rRNA methyltransferase |
|---|
| Protein accession | YP_001015352 |
|---|
| Protein GI | 124026236 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.877523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTATAA ATAAAACTCT AAAAGTAATA CTTGTCGAGC CAGCGGGGCC AATCAATGTT
GGGAGTGTTG CAAGACTCTG TGAAAACTTT AGTGTTCATG AATTACGACT AGTTTCACCT
AAATGCGAAT ATTTAGCTCA AGAAGCAAAA AAGATGGCTG TAAGAGGATT GAAGATCTTA
GAGAAAGCAA AAGTGTATGA AGATCTAAAT TCAGCACTTT CAGACTGCTC AAGAATTATT
GCCACTTGCG GTAGAAAAGA ACATGGAGAA ATCCCTCTTA ATTCAAATAA AGATGCTTTG
AGCTGGGTTC TTAAATCAGA AAGAGAAGAG ACAATAGCTT TAGTTTTTGG AAGAGAGGAC
AGAGGTTTAT CTAACGAGGA GCTTTTAAAA GCAAATAAAG TGATTAGTCT TAATACCAGC
GAGGATTATC CATCATTAAA TCTTTCACAT GCAGTAGCAA TTGTTCTTCA TCAATTCAAC
CAATTGAATG ATCTTGATTT ATTAAAAAAA CATACTAAAA CAAGCTCTCC TGCGAATTTA
ATTAAATTAG AAGATTGTAT TAATGACGCA GGTAGTCTTT TGCTTGATAT TGGTTTCTTG
ATGAAACATA CCTACAAAGC TAAAATGACG AAGATCAAAC AATTACTTTT GAGAGGTGAG
ATAAAAGATG ATGAAGTTGC ACTAATTAGA GGTATAATTA GCCAAGCAAG ATGGAAGATT
AAAAATAAAA ATGATTAA
|
|---|
| Protein sequence | MAINKTLKVI LVEPAGPINV GSVARLCENF SVHELRLVSP KCEYLAQEAK KMAVRGLKIL
EKAKVYEDLN SALSDCSRII ATCGRKEHGE IPLNSNKDAL SWVLKSEREE TIALVFGRED
RGLSNEELLK ANKVISLNTS EDYPSLNLSH AVAIVLHQFN QLNDLDLLKK HTKTSSPANL
IKLEDCINDA GSLLLDIGFL MKHTYKAKMT KIKQLLLRGE IKDDEVALIR GIISQARWKI
KNKND
|
|---|
| |