| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_15151 |
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| Symbol | ispA |
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| ID | 4779543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1228938 |
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| End bp | 1229837 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640084797 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001015337 |
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| Protein GI | 124026221 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.423714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGAAG CAATCGCTTC TTTTGACTTC GCTGAGTATC TAGAGAAAGC TAGAACTCGC
GTTGAAGATG CGCTGGGTGC GTCTCTGGGC CCTGAAAAGC CAGAAAAATT AAGGGAATCT
ATGCGCTATT CCCTTTTGGC GGGAGGGAAG AGATTGAGAC CAATACTTTG TCTTGCTGCC
TGCGAACTCG CTGGAGGCGA ACTTGAAAAA GCATTGCCAA CAGCAGTTGC TCTGGAAATG
ATTCATACAA TGTCTCTTAT CCATGATGAT CTGCCTTCAA TGGATAATGA TGATCTTCGT
CGAGGGCGTC CAACTAATCA CAAGGTTTAC GGAGATGCGG TGGCCATACT TGCTGGAGAT
GCTCTATTGA CCAGAGCTTT TGAGATGGTG TCAATTCGAA CAGAGGGAAT ACCTTCAGAG
AGACTATTGA AAATAATTGG TGAGCTTTCT TTAGCGGCAG GGGCTCCTGG GCTAGTGGGA
GGACAAGTAG TTGATCTCGA TTGTGAGGGG AAAGAAGTTG ATTTAGAAAC TTTGGAGTAT
ATTCACCTTC ATAAAACAGG AGCTCTACTT AAGGCATGTG TCACTTGCGG AGCATTGATT
GGCGGAGCTG ATGAGAAACT CCTAGACGCA CTAAGTATCT ATGCCAGAGG GATTGGATTG
GCATTCCAAA TAATTGATGA CATCCTTGAT GTAACAGCAA GTAGTGAAGT ATTGGGAAAA
ACGGCAGGAA AGGATTTAAT TGCTGATAAG ACTACTTACC CCAAATTACT TGGTCTTGAT
GAATCAAGAA GGAGAGCAGA TCTTTTAGTA GCTAAAGCAA AAAGTGCTCT TGATCCTTGG
CCAGAAAAAT CAAAACCTCT TCTTGCATTG GCTGATTACA TTACAAGTAG AGATAGATGA
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| Protein sequence | MQEAIASFDF AEYLEKARTR VEDALGASLG PEKPEKLRES MRYSLLAGGK RLRPILCLAA
CELAGGELEK ALPTAVALEM IHTMSLIHDD LPSMDNDDLR RGRPTNHKVY GDAVAILAGD
ALLTRAFEMV SIRTEGIPSE RLLKIIGELS LAAGAPGLVG GQVVDLDCEG KEVDLETLEY
IHLHKTGALL KACVTCGALI GGADEKLLDA LSIYARGIGL AFQIIDDILD VTASSEVLGK
TAGKDLIADK TTYPKLLGLD ESRRRADLLV AKAKSALDPW PEKSKPLLAL ADYITSRDR
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