Gene NATL1_15131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_15131 
Symbol 
ID4779086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1226969 
End bp1228315 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content37% 
IMG OID640084795 
Productexodeoxyribonuclease V 
Protein accessionYP_001015335 
Protein GI124026219 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCT TTGCAGGTAG CGGAAAAACA TATTTATCGA TGAAATTATT AAAAAAGGTC 
GATGAGCTTG GTTTGTGTTG GACAGTAGTT GCACCAACTC ATAAAGCGGT AGGTGTACTA
AGGGAGGGTT TGAAAAATGA ATCTATTCAA CCCACATGGT TCCCCTCTAC TATTCACCGT
TTGCTTCGAC TTAAGTTAAA GAGACAGGCG GATATAGAAA TATGTGAAAA AACAGATCAA
ACAGAGAGCT CTTTGGAGAA TTTAGGACTT GTTTTAATTG ATGAAGCATC AATGATTGAT
TCCAAATTAT TGGAGATAAC TCTTGAATGC GCAAGATGCA ATTCGACTCG TTTGGTTTTT
GTTGGCGATC CTGCTCAACT ACCACCAGTG GGAGAAAGTA CTAGCTCAGT TTTTTTAATG
AAAAGAGCTG TAAATACTGA ACTTAGGGAA GTTGTTCGTC ATCAAGGGCC TGTTCTGAAA
TTGGCAAAAA TAATTAGAGA CGGGCAAATC CCTTGTATGC AACCACCAAT AGTACAGGTT
GTTAATTCTA AGAAAGGTAA TGTTGGAATA TTAGATAGAA CAAGTTGGCT TGAAAGAGCT
AAATCAGCAT TGAGATTATC TTCCTTAGAG GATGATCACG ATAGAGCAAG AATTTTGTGT
TACACGAACC GTATTGTTGA TAATTTAGTT CCTCATGCAA GAAGAGCTAT ACATGGTGAG
ATGGCAGATC AATATCAGGT TTTACCTGGG GAGGTTTTAA TAAGCCGTAA AGCTGTAATG
GTAAATGCGT CATTAAATGA GGATGAGCTT GGAGAAGAAC CAGATATTTT GATTAGTTCC
AATAGAGAGA TGGTGGTAGA AGATGTTATT CCAAATAGTT TTGACTTGGC CTCTTTAGGA
ATCCATCAAG ATTTTGAAAA CCCTTTACCA GTTATTGAAA CTCAGATAGC TAAAGTTAAC
TGCGATCAAA AAGAATTTTC TTTGAGGTTA ATGCCTCAAA TAGGTTCTAA AGCTCGTAAA
GATTTGGATC TTTCTTTGAA TGAATTGAGC AATTTGGCAA GAGAGAGAGG AAAAAAAAAT
AGTGGTTCCA TTTGGAAACT TTTCTTTTTT ATCCGAGATT CATTCGCCTC TTTAGGTCCT
GCTTCCGTAC TTACAATTCA CAGGAGTCAA GGAAGTACTT TTGGAGAAGT GTTTATAACT
TCTGATGCCT TTTGGCCTAA AGATCTTGAA TTTAGAAGAA GGCTTGTATA TGTTGCTGTA
AGCAGAGCGA GTAAAGGAGT ATGGATCGTT GGTGATAATA AAAGCAAGAT GAATCAAGCT
CTTTTAGAGA AATTATTAAT GGATTGA
 
Protein sequence
MKGFAGSGKT YLSMKLLKKV DELGLCWTVV APTHKAVGVL REGLKNESIQ PTWFPSTIHR 
LLRLKLKRQA DIEICEKTDQ TESSLENLGL VLIDEASMID SKLLEITLEC ARCNSTRLVF
VGDPAQLPPV GESTSSVFLM KRAVNTELRE VVRHQGPVLK LAKIIRDGQI PCMQPPIVQV
VNSKKGNVGI LDRTSWLERA KSALRLSSLE DDHDRARILC YTNRIVDNLV PHARRAIHGE
MADQYQVLPG EVLISRKAVM VNASLNEDEL GEEPDILISS NREMVVEDVI PNSFDLASLG
IHQDFENPLP VIETQIAKVN CDQKEFSLRL MPQIGSKARK DLDLSLNELS NLARERGKKN
SGSIWKLFFF IRDSFASLGP ASVLTIHRSQ GSTFGEVFIT SDAFWPKDLE FRRRLVYVAV
SRASKGVWIV GDNKSKMNQA LLEKLLMD