| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_14901 |
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| Symbol | lysA |
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| ID | 4781148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1200167 |
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| End bp | 1201531 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640084771 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001015312 |
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| Protein GI | 124026196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.813083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGGAT CAAAGGCTTA TGAACCTAAT GTGGATATTG ATAGTCCAAA TCGAAATATA
GCTCCGATCA CTTCAGAAAT TAATGAGAGT AAAAAATTAG TTGTTGGAGG ATGTCAACTC
AGTGAACTAG CGAAAAAATA TGGCACACCT CTTTATGTTT TAGATGAGTT TTCACTTAGG
ACTGCATGCA AAACTTATAT TTCTTCTTTA AATAAACATT ACCCAGGGAA GTCACTTCCT
CTATTTGCTT CAAAAGCAAA TAGCTCCCTA GCTATTTGTG CAGTTATTGC TTCTGAAGGT
TTTGGGCTTG ATGCAGTATC AGAGGGTGAA TTACTTACTG CAATAAATGG AGGTGTAAAA
GAGAAAGATA TTGTTTTTCA TGGAAATAAC AAATCTCAGG ATGAATTGAA TTTTGCCTAC
AGTAATAATG TGACGATTGT TTTAGATAAT TATCATGATA TTGAGTTACT AAAAAATATT
GCCTCCGATA ACAAGCCAGC AAAGTTAATG TTGAGGTTTA CTCCTGGAAT TGAATGTCAT
ACTCATGAAT ATATAAGGAC TGGGCATTTA GATAGTAAAT TTGGTTTTGA TCCTGATGAT
CTTAAGTCAA TTTTAGAAGA ATTAAAAACG TATAAGTGGG CTAATTTAAC TGGTTTACAT
GCACATATAG GGTCTCAAAT TTTTGAAGTT CAACCCCATA TCGATCTTGC TGGCGTTATG
GCTGATGCTT TAAAGCTTGC TAAGGAAATT GGTCATCCAG TTGTTGATCT AAATTTAGGA
GGCGGTTTAG GGATTAAATA TGTTCAAGAA GATAATCCTC CCTCTATTGA AAAATGGGTT
GAAATTATTT CTAAGGCTGT TGTTAAGGCT TGTAGGGAAA GAAATCTTGA TTTACCAAGA
TTAATGTGTG AACCGGGAAG ATCTCTTGTC GCTAATTCGG GGCTCACTAT TTACAAGATT
GGAGCTAAAA AAGTTGTCCC TGGTGTCAGA ACTTATTTAT CTGTTGATGG AGGGATGAGT
GATAATCCTC GTCCAATAAC CTATCAGTCT CTTTACAGTG CATGTTTAGT CGATAAACCA
ATGAATACAA ATTTTGAAAA AGTCACAATA GCCGGGAAGC ATTGTGAGTC TGGAGATGTT
TTATTGAAAG ATTTTCTACT TCCTTCTTGT GAAAGTGGCG ATTTTCTTGC TGTGTTTGGA
ACGGGTGCAT ACAACTATTC AATGAGTTCC AATTACAACA GAATACCTAG ACCTGCGACA
ATTATGGTTG GGAAAGGTTC GGCCGAGTTG ACTCAAAGGA GAGAACTTCC TGAAGATCTA
TTGCAATTAG ATGTATTGCC CGATCGCTTT ATTCCCAAGA ATTAG
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| Protein sequence | MHGSKAYEPN VDIDSPNRNI APITSEINES KKLVVGGCQL SELAKKYGTP LYVLDEFSLR
TACKTYISSL NKHYPGKSLP LFASKANSSL AICAVIASEG FGLDAVSEGE LLTAINGGVK
EKDIVFHGNN KSQDELNFAY SNNVTIVLDN YHDIELLKNI ASDNKPAKLM LRFTPGIECH
THEYIRTGHL DSKFGFDPDD LKSILEELKT YKWANLTGLH AHIGSQIFEV QPHIDLAGVM
ADALKLAKEI GHPVVDLNLG GGLGIKYVQE DNPPSIEKWV EIISKAVVKA CRERNLDLPR
LMCEPGRSLV ANSGLTIYKI GAKKVVPGVR TYLSVDGGMS DNPRPITYQS LYSACLVDKP
MNTNFEKVTI AGKHCESGDV LLKDFLLPSC ESGDFLAVFG TGAYNYSMSS NYNRIPRPAT
IMVGKGSAEL TQRRELPEDL LQLDVLPDRF IPKN
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