Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_14811 |
Symbol | |
ID | 4780439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1191858 |
End bp | 1193648 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640084762 |
Product | multidrug ABC transporter |
Protein accession | YP_001015303 |
Protein GI | 124026187 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.25024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.341749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAT CTAAATCAAA CAAAGAAAAA AGCCCTTTAA CAAGACTTTT AAGTAACCTT AAAAGTCAAA AGCGTCTAAT TTATTCAGCT ATTATTTGTT CTACATTAAA TAAATTTTTT GATCTTGCAC CACCTGTACT AATTGGAATA TCTGTTGACG TAGTAGTAAG AAAAGAAAGT TCATGGCTTG GTTCAATTGG CTTTAATACT GTCCCAGATC AGTTAATTGC ACTCTCAATC GCTTCCTTTT TGATCTGGAC AGCTGAATCA TTCTTTGAAT ATTTATATGG ATTAATGTGG AGAAATTTAG CTCAAAAGAC ACAGCACTAT TTAAGAATCA AAGCATATGA CCATTTACAA AAATTAGAGA TGACATTCTT CGAATCAGAT AATACAGGAA GGCTTATGAC TGTACTAAAT GATGATATTA ATCAACTGGA AAGATTCTTG GATGAAGGAG CTAATAAAAT TATTCAATTA ATAATTACTG TTTTTATAGT TGGAGGGGCA ATGATTTTAT TAGCCCCAGG AATTGCATTG CTAGCATTCA TACCTATTCC ATTTATTCTT TGGGGCTCGA TTAGATTCCA GAAGAACCTA GCTCCTCGCT ATCGTGAAGT CAGAGATAGG GCTGGAGATC TTGCCTCAAG ACTTAATAAT AATCTCAGTG GAATGCTAAC TATTAAAAGT TTCGCTACTG AAGATTGGGA ACTAGAAAGA TTAAGACTAG ATAGCAATTT ATATCAAGAA AGTAATAGAA AAGCGATTAA GTTATCAGCA GCATTTATCC CCTTAATAAG ATTCGCGATA CTATTTGCAT TTCTTGCAAT ATTAATTGCT GGGGGCTTCC AATCTTGGAA AGGATTAATG CCTGTGGGAA CTTATAGTTT TTTAGTATTT ATAACTCAAA GATTATTATG GCCCTTAACA ACATTAGGTC ATATCCTGGA TGATTATCAA AGATCAATGG CCTCAACAAA TAGAGTATTA GATTTAATCG ATACTCCAAT TAAAATTAAA ACTGGGAAAG TCAAGTTAGA TCCATGTAAT GTTAAAGGTG CAATCACATT TAACAATATT GATTTTACAT ATGAAGGACG GTCTCAAGTC ATAAAAAACT TTAATTTAGA TATTAGTCCT GGAAAAAAAA TAGGTATTGT AGGTGCTACT GGTTCTGGAA AAAGTACACT TATAAAACTC TTATTAAGGC TGTATAAAAT CAGTAAAGGT TCAATAGAAA TTGATAATAA TTCAATTGAA TCATTGGAAT TAAAAAGTCT ACGACGTTGT ATTGCATTAG TAAGCCAGGA AACATATTTG TTCCAAGGTA CAATTGAAGA AAATATTTCT TATGGATCGC AAAATATTGA TAAATCAAAA ATAAAAAATG CTGCAGATAT TGCCGAAGCA ACTGAATTTA TTAATCAACT TCCACAAGGC TTAAACACAA TAGTGGGAGA AAGAGGACAA AAGTTATCCG GTGGCCAAAG ACAAAGAATT GCTATCGCAA GAGCAATCTT AAAAAACGCC CCTATTTTAA TATTAGATGA AGCAACAGCC TCTGTAGACA ATGAAACTGA AGCCGCGATT CAAAGGTCTC TAAAGAAGAT AACAACTAGT TGTACCACAA TTGTTATTGC ACATCGTTTA AGCACAGTAA TAGATGCTGA CGAAATTATA GTTTTAGATA AAGGTAAAAT TATAGAGAAA GGCACACATC ATTCTCTTCT AGAAAATAGA GATTTCTATT ACCACCTTTG GAAAATTCAA GCTGGTGGAA GTAATACTTA A
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Protein sequence | MYKSKSNKEK SPLTRLLSNL KSQKRLIYSA IICSTLNKFF DLAPPVLIGI SVDVVVRKES SWLGSIGFNT VPDQLIALSI ASFLIWTAES FFEYLYGLMW RNLAQKTQHY LRIKAYDHLQ KLEMTFFESD NTGRLMTVLN DDINQLERFL DEGANKIIQL IITVFIVGGA MILLAPGIAL LAFIPIPFIL WGSIRFQKNL APRYREVRDR AGDLASRLNN NLSGMLTIKS FATEDWELER LRLDSNLYQE SNRKAIKLSA AFIPLIRFAI LFAFLAILIA GGFQSWKGLM PVGTYSFLVF ITQRLLWPLT TLGHILDDYQ RSMASTNRVL DLIDTPIKIK TGKVKLDPCN VKGAITFNNI DFTYEGRSQV IKNFNLDISP GKKIGIVGAT GSGKSTLIKL LLRLYKISKG SIEIDNNSIE SLELKSLRRC IALVSQETYL FQGTIEENIS YGSQNIDKSK IKNAADIAEA TEFINQLPQG LNTIVGERGQ KLSGGQRQRI AIARAILKNA PILILDEATA SVDNETEAAI QRSLKKITTS CTTIVIAHRL STVIDADEII VLDKGKIIEK GTHHSLLENR DFYYHLWKIQ AGGSNT
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