| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_14691 |
|---|
| Symbol | |
|---|
| ID | 4780669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1176805 |
|---|
| End bp | 1177569 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640084750 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_001015291 |
|---|
| Protein GI | 124026175 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.132919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACATTAA TACCTGCAGA TCAGCTTGCT ACTGAGCAAA TCCAAGGATC TCCCTCAGGT
TCTTCTCCTA TTCAAGCAAC CACACAATCA CCATCCAAGG TGCTTGTTGT AGAACCACAT
CCAACTCTCA GAACTGTTTT GGTTCAGAGG CTCAGGCAAG ATGGACAGCT GGCCGCAGCA
GTAGGTTCAG CTGAGGAGGC CGTTGACCTA TGTCGAGACC AATCACCTGA TTTATTAGTT
AGTGCAGAGA TATTAGAAAA AAGCTCTGCT CTCCGACTGG CACAACAATT GGGATGTTCA
GTGATTGTTC TAACAGCAAG AACAGGAGTT GAACCTGTTG TAGGCCTTTT AGATGATGGT
GCTGATGATG TTTTAAGGAA ACCTTTTGGC TTGGAAGAAC TAGCTGCAAG ATGCAGGACT
TTACTTAAGA GAGGAAGAAT TGGTTTACAA GAACGTGTCG CTGTTGGTCC TCTTGAGGTT
CATCTACTTC TCAGACAGGT CACCTTGCGA GAGAAACCTG TAGAACTAAG TCCAAGGGAA
TTTGCTTTGT TGTGTGCCTT GTTGATGCCG CCTGGCATGG TAAGAAGCCG TCATGAGCTG
CTACGAATGG CTTGGCCGCC GTTTAGCGGT GGTCCTCGCT CAGTTGATAC GCAGGTTTTG
ACGCTTAGAA GAAAACTGGA ACAAGCAGGT CTAGGTGATG GCGGAGGAAT TACAACTGTT
CGCCAGCAGG GCTATAGGTT TAGTCTTGAT AATTTGCCGT CATAA
|
|---|
| Protein sequence | MTLIPADQLA TEQIQGSPSG SSPIQATTQS PSKVLVVEPH PTLRTVLVQR LRQDGQLAAA
VGSAEEAVDL CRDQSPDLLV SAEILEKSSA LRLAQQLGCS VIVLTARTGV EPVVGLLDDG
ADDVLRKPFG LEELAARCRT LLKRGRIGLQ ERVAVGPLEV HLLLRQVTLR EKPVELSPRE
FALLCALLMP PGMVRSRHEL LRMAWPPFSG GPRSVDTQVL TLRRKLEQAG LGDGGGITTV
RQQGYRFSLD NLPS
|
|---|
| |