| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_14261 |
|---|
| Symbol | |
|---|
| ID | 4780422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1153764 |
|---|
| End bp | 1154663 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640084706 |
|---|
| Product | amino acid ABC transporter permease |
|---|
| Protein accession | YP_001015249 |
|---|
| Protein GI | 124026133 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ATCAAAAATT ATTTTTGCAA TTTGGAATAT CTATTATCTT TTTTGGTTTA
TTTGGGATAC TGATTAATAA TTTAACAATA AATCTAATAA GAACAGGTCT TGGTTTTAAT
TTTAGCTGGC TTTTTAAACC AGCAAGTTTT GCTTTAGCGG AACACCCCTT ACCTTATACC
TCTTCAGATA GCTATGCTTG GGCTTTGTTT ATAGGTTGGC TTAACAGTCT TAAAGTTATT
GTCTCATCAT TAATATTGGC TACTTTCTTT GGGACACTAA TAGGCTTTGC TAGGACAGGT
ACGAACTCAT TACTAGGTCT CATTTCGGCT GGTTACATCA CAATAATTAG ACAAACCCCT
CTTTTACTTC AACTTATGTT TTGGTATTTT GTTGGGTTCT TAGGTTTAAA AGACAATATG
TTTATCCAAA TAAAAAATAT ATTTAACATT TCAAATAAAG GAATAGAGTT TTCAGGATTA
ACTTTTTCTT CGGAGTTTCT AGCATTATTA TTTGGTCTAA GTATCTTTAC AAGTGCTTAC
ATAGCAGAGG TAATCCGCGG AGGTATTCTT TCTGTTTCGA GAGGGCAATG GGAAGCATTT
AGGAGCTTAG GAATTTCAGA AAGAAAAGGA CTTATCCGCA TAATACTTCC ACAGGCATTA
CCAGCGATTA TTCCTGGACT AACAAGTCAA TACCTTAACC TTGCTAAAAA TAGTACCTTA
GCTATAGCCG TTGGATATTC AGATATTTAC GCAATTAATG ATACTATCAT TAATCAAACA
GGTAGAGCTA TCGAGTGTTT TATTATATTA CTTTTTAGCT TCTTGCTATT AAATTTATTA
ATAACTAATG CCATGGAAAT CATAAATAGA TTGATTTTAA AATCACAAAG ATACAGTTGA
|
|---|
| Protein sequence | MKKNQKLFLQ FGISIIFFGL FGILINNLTI NLIRTGLGFN FSWLFKPASF ALAEHPLPYT
SSDSYAWALF IGWLNSLKVI VSSLILATFF GTLIGFARTG TNSLLGLISA GYITIIRQTP
LLLQLMFWYF VGFLGLKDNM FIQIKNIFNI SNKGIEFSGL TFSSEFLALL FGLSIFTSAY
IAEVIRGGIL SVSRGQWEAF RSLGISERKG LIRIILPQAL PAIIPGLTSQ YLNLAKNSTL
AIAVGYSDIY AINDTIINQT GRAIECFIIL LFSFLLLNLL ITNAMEIINR LILKSQRYS
|
|---|
| |