Gene NATL1_13231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_13231 
Symbol 
ID4781282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1109709 
End bp1110131 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content34% 
IMG OID640084603 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001015146 
Protein GI124026030 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.107731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTA GGATTAATAC TAAGCTTGAA ATACCAGATA ACGAAATTAA GTGGAGATTC 
TCTAGATCAT CAGGAGCTGG TGGACAGAAC GTAAATAAGA CAGACAGTCG AGCTGAAATT
GTATTTAACG TATCTGAATC AAAAACTTTA ACTCCATACC AGAAATATAG GATCTCAATT
CAGGATGAAG TCAAGCTCTC TAATGGTTGT ATTTGTATAG CTGTTCAAGA TAAAAGAACA
CAATATCAAA ATAGACAATT AGCTTTAACT AGACTTACTT CAACCTTACG AGAGCTTTTA
AAGCCACCTC CAAAGAAAAG AAGAGAGACA ATACCTACTC GCTCATCACA GAGGAAGAGA
ATTGAGTCAA AGAAGAAAAG AGGTGAATTA AAAAGGAATA GGCAATCAAA TATAGATTTT
TAA
 
Protein sequence
MNLRINTKLE IPDNEIKWRF SRSSGAGGQN VNKTDSRAEI VFNVSESKTL TPYQKYRISI 
QDEVKLSNGC ICIAVQDKRT QYQNRQLALT RLTSTLRELL KPPPKKRRET IPTRSSQRKR
IESKKKRGEL KRNRQSNIDF