Gene NATL1_12521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_12521 
Symbol 
ID4779301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1080352 
End bp1080765 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content34% 
IMG OID640084531 
Producthypothetical protein 
Protein accessionYP_001015075 
Protein GI124025959 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.603502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC AAGTTATTAC ATGCATTCTC TCAATTCTAT TTGTTGTTAC ACTTACACCC 
TATAAAGCAA ATGCAACGAC AAATGATCTT CCAGAATGTG TTGTCATAAC TCACTGTGTG
AGAGAAGACT TTAAAGTAAA TGATATAGAA AATGCTTTTA AAAAAGCCAC CAAAATAGTT
TCTGAAACAG CAAGAACAAA AATAGTTGAG AAGACTGATT CATATATTCA TGCTGAAGCA
AAGACAAAAT GGAGAAGATA TACCGATGAT TTACTCCTCA AAGCAATTCC AGAGAAAGGT
ATTATTCAAG TCAGGTCAGA ATCAAGAGTT GGCGTTGGAG ATAATGGAGT CAACAAGAAG
AGAGTTGATG ATTTTGCTTA TCGTCTAATG ACAGAAAGAG ACAACACTAA CTAA
 
Protein sequence
MIKQVITCIL SILFVVTLTP YKANATTNDL PECVVITHCV REDFKVNDIE NAFKKATKIV 
SETARTKIVE KTDSYIHAEA KTKWRRYTDD LLLKAIPEKG IIQVRSESRV GVGDNGVNKK
RVDDFAYRLM TERDNTN