Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_11561 |
Symbol | |
ID | 4780793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1032677 |
End bp | 1033939 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640084435 |
Product | major facilitator superfamily multidrug-efflux transporter |
Protein accession | YP_001014979 |
Protein GI | 124025863 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0178194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATTAT CGGCTTTGCA ACAATATGGA ATCGTAACGA CCAACTATTG GGCATTCACA CTGACAGATG GTGCTCTAAG AATGCTAGTG ATTTTTCACT TTCATAGCCT TGGATATACA ACATTAGAAA TCGCATTCTT ATTCCTTTTT TATGAGTTCT TTGGCGTTAT CACTAATCTC TATGGAGGAT GGATAGGAGC AAGGTATGGA TTACGTCTAA CACTTTGGGT CGGGACTCTT TTACAAATCG GTGCCTTATT GATGTTGATA CCCGTTTCGA GTGGTTGGTC GAAACTTTTG AGTGTCATCT ATGTCATGGT TGCTCAAGCA ATTAGTGGTA TAGCAAAAGA TCTCAATAAG ATGAGTGCTA AAAGTGCCAT CAAAACTGTC GTTCCAGACT CCTCAGGAGA TGATGGTGGG AATAATCAAC TATTTAAATG GGTAGCCATC TTAACTGGTT CCAAAAATGC ACTCAAAGGA GTTGGCTTCT TTCTTGGTGG ATTGTTGCTG ACCAGTTTCG GTTTTAATAA AGCAGTTGAA TTTATGGCAA TCGGATTAGG TGTTTCGTTT TTATTGACAT TGATTTTGCC TGGAGATATT GGAAAGATGA AAAGCAAACC TATCTTTAAA GACTTATTCT CTAAATCTCA AGGTATCAAC GTCCTATCTT TTGCACGTTT TTTTCTCTTT GGAGCAAGAG ATGTATGGTT CGTCGTAGCA CTTCCTGTTT TTCTTGAAAC GTATTTAAAT TGGAATTTTT CTGAGATTGG AGCGTTCCTA GGATTGTGGG TTATTGGTTA TGGCTTTATC CAAGCGTTTG CACCGTCTTT AAGAAATTTA TGGGGAAAGA AAACAAGTCC AGGAGTTTCT TCTGTTCAAT TTTGGAGTGC AGTCTTAACT GCGATACCTG CTCTAATAGC AATAGCACTA TGGCGACAAA GCAATCCAGA AATAGCAATT ACCGTTGGAT TAATACTATT TGGATTCATT TTTGCAATGA ACTCATCGAT ACATTCATAT ATGGTTCTTG CCTATACGGA CAAGGAAAAC GTAAGTCTAA ACGTAGGCTT CTATTACATG GCAAATGCTG CAGGGAGACT GATTGGTACT CTCCTATCAG GAGTTTTATT CATGCTTGGA ACTAATGCAT CTATAGGGAT GCAATTATGT TTATGGTGTT CAAGCTTATT TGTATTTATC TCATTGTTGA CTAGTTTACG ACTACCACCA GTTTCAAGTG CTATAGCTAT TGAAAAAGCC TAA
|
Protein sequence | MRLSALQQYG IVTTNYWAFT LTDGALRMLV IFHFHSLGYT TLEIAFLFLF YEFFGVITNL YGGWIGARYG LRLTLWVGTL LQIGALLMLI PVSSGWSKLL SVIYVMVAQA ISGIAKDLNK MSAKSAIKTV VPDSSGDDGG NNQLFKWVAI LTGSKNALKG VGFFLGGLLL TSFGFNKAVE FMAIGLGVSF LLTLILPGDI GKMKSKPIFK DLFSKSQGIN VLSFARFFLF GARDVWFVVA LPVFLETYLN WNFSEIGAFL GLWVIGYGFI QAFAPSLRNL WGKKTSPGVS SVQFWSAVLT AIPALIAIAL WRQSNPEIAI TVGLILFGFI FAMNSSIHSY MVLAYTDKEN VSLNVGFYYM ANAAGRLIGT LLSGVLFMLG TNASIGMQLC LWCSSLFVFI SLLTSLRLPP VSSAIAIEKA
|
| |