Gene NATL1_11561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_11561 
Symbol 
ID4780793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1032677 
End bp1033939 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content38% 
IMG OID640084435 
Productmajor facilitator superfamily multidrug-efflux transporter 
Protein accessionYP_001014979 
Protein GI124025863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0178194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTAT CGGCTTTGCA ACAATATGGA ATCGTAACGA CCAACTATTG GGCATTCACA 
CTGACAGATG GTGCTCTAAG AATGCTAGTG ATTTTTCACT TTCATAGCCT TGGATATACA
ACATTAGAAA TCGCATTCTT ATTCCTTTTT TATGAGTTCT TTGGCGTTAT CACTAATCTC
TATGGAGGAT GGATAGGAGC AAGGTATGGA TTACGTCTAA CACTTTGGGT CGGGACTCTT
TTACAAATCG GTGCCTTATT GATGTTGATA CCCGTTTCGA GTGGTTGGTC GAAACTTTTG
AGTGTCATCT ATGTCATGGT TGCTCAAGCA ATTAGTGGTA TAGCAAAAGA TCTCAATAAG
ATGAGTGCTA AAAGTGCCAT CAAAACTGTC GTTCCAGACT CCTCAGGAGA TGATGGTGGG
AATAATCAAC TATTTAAATG GGTAGCCATC TTAACTGGTT CCAAAAATGC ACTCAAAGGA
GTTGGCTTCT TTCTTGGTGG ATTGTTGCTG ACCAGTTTCG GTTTTAATAA AGCAGTTGAA
TTTATGGCAA TCGGATTAGG TGTTTCGTTT TTATTGACAT TGATTTTGCC TGGAGATATT
GGAAAGATGA AAAGCAAACC TATCTTTAAA GACTTATTCT CTAAATCTCA AGGTATCAAC
GTCCTATCTT TTGCACGTTT TTTTCTCTTT GGAGCAAGAG ATGTATGGTT CGTCGTAGCA
CTTCCTGTTT TTCTTGAAAC GTATTTAAAT TGGAATTTTT CTGAGATTGG AGCGTTCCTA
GGATTGTGGG TTATTGGTTA TGGCTTTATC CAAGCGTTTG CACCGTCTTT AAGAAATTTA
TGGGGAAAGA AAACAAGTCC AGGAGTTTCT TCTGTTCAAT TTTGGAGTGC AGTCTTAACT
GCGATACCTG CTCTAATAGC AATAGCACTA TGGCGACAAA GCAATCCAGA AATAGCAATT
ACCGTTGGAT TAATACTATT TGGATTCATT TTTGCAATGA ACTCATCGAT ACATTCATAT
ATGGTTCTTG CCTATACGGA CAAGGAAAAC GTAAGTCTAA ACGTAGGCTT CTATTACATG
GCAAATGCTG CAGGGAGACT GATTGGTACT CTCCTATCAG GAGTTTTATT CATGCTTGGA
ACTAATGCAT CTATAGGGAT GCAATTATGT TTATGGTGTT CAAGCTTATT TGTATTTATC
TCATTGTTGA CTAGTTTACG ACTACCACCA GTTTCAAGTG CTATAGCTAT TGAAAAAGCC
TAA
 
Protein sequence
MRLSALQQYG IVTTNYWAFT LTDGALRMLV IFHFHSLGYT TLEIAFLFLF YEFFGVITNL 
YGGWIGARYG LRLTLWVGTL LQIGALLMLI PVSSGWSKLL SVIYVMVAQA ISGIAKDLNK
MSAKSAIKTV VPDSSGDDGG NNQLFKWVAI LTGSKNALKG VGFFLGGLLL TSFGFNKAVE
FMAIGLGVSF LLTLILPGDI GKMKSKPIFK DLFSKSQGIN VLSFARFFLF GARDVWFVVA
LPVFLETYLN WNFSEIGAFL GLWVIGYGFI QAFAPSLRNL WGKKTSPGVS SVQFWSAVLT
AIPALIAIAL WRQSNPEIAI TVGLILFGFI FAMNSSIHSY MVLAYTDKEN VSLNVGFYYM
ANAAGRLIGT LLSGVLFMLG TNASIGMQLC LWCSSLFVFI SLLTSLRLPP VSSAIAIEKA