Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_11511 |
Symbol | |
ID | 4780977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1028361 |
End bp | 1029347 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640084430 |
Product | porin |
Protein accession | YP_001014974 |
Protein GI | 124025858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0116362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT TTAAGAGCTT GTTAATAGCT CCTGCAGCAT TAGGCCTTAT GGCTCCTGTT GCTGTTAATG CAGATACTGC ATTTAGCCCA ACTACAAAAT TAAAAAGCAG TGTAAATTTC ACTGTTGGTT CTAATACAGA TTCAGCAGAT GGAGACGAGC TTCATTCTTC ATATGAAATG AAGTGGAAAG CTACTACTAG TTTTACTGGT GAAGACAAGC TTGTTGGAAA ATTTGAAATT GGAAGTGGTA AAACCTTGGC TGGGGGAATC GATCCTCAAA GCAGTAAGGG CGGCGGTAAA ACTCCAACTC TTACTGATCT TTATTACCAA TTCCCTCTTG CGGAAGACTT AACAATAAGC GTCGGACCAA AGATGGATGG AGATCAAGGT CTTGCTGGTA CTACATCTAT CTATGGTGAG CCAGTTCTAT TAGCAGTTGA TGGATACTAT GCTCTTGCCG GTGAAGGTGG AACAGGTGCA ACTATCGCTT ATGCAGGAGA TAATGGCTGG AATGCTTCTC TTAACATGAC AGCTGCTGAT GGTGATGATG CAAGTAAGGG AATCTTTGGT GACGATACTG AAGACTATGT AACTGCTCAG CTTGGTTTTG ATGGAGATGG TTTTGGCGGA ACATTTACAT ACAGTGACAG CAGTGATACA TACACTGCAT ACGGTATTGG TGGCTATTTC CAGCCAGAAT CAATCCCTGT TACCGTAAGT GCTTATTTTG ATTCAATGGA TCCTGAAACG GGTGAAGAAG ATGAAAACTG GGTTGTTGGT GTAGAAGCTG ATGCAGGTCC AGGTACACTT GGCGTAGGCG TAGGAACTCA AAAGGGAACT GATGAGAAGC TTACATACGA AGCTTGGTAT GACTACAAGA TTGCTGATGG CGTCAAGATC ACACCAATGA TCTGGACATC AGAAGATGCT GGTGTAGGTG GAGAGGATCT ATCTGGCGCA GCTGTTAACG TTAAGTACAA GTTCTAA
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Protein sequence | MKFFKSLLIA PAALGLMAPV AVNADTAFSP TTKLKSSVNF TVGSNTDSAD GDELHSSYEM KWKATTSFTG EDKLVGKFEI GSGKTLAGGI DPQSSKGGGK TPTLTDLYYQ FPLAEDLTIS VGPKMDGDQG LAGTTSIYGE PVLLAVDGYY ALAGEGGTGA TIAYAGDNGW NASLNMTAAD GDDASKGIFG DDTEDYVTAQ LGFDGDGFGG TFTYSDSSDT YTAYGIGGYF QPESIPVTVS AYFDSMDPET GEEDENWVVG VEADAGPGTL GVGVGTQKGT DEKLTYEAWY DYKIADGVKI TPMIWTSEDA GVGGEDLSGA AVNVKYKF
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