Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_10661 |
Symbol | |
ID | 4779174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 984409 |
End bp | 986145 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640084345 |
Product | ABC transporter |
Protein accession | YP_001014889 |
Protein GI | 124025773 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.480699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0347251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA AAAACAAAAT AAATTTTATT TACCTGATAG GGAAACTAAA GGGACATTTG CCAACATTGC TTTTGGGTGG CATAAGCATG TTTATATACG TAATTTGTTG GCCAATACTT GCATGGTTAT CAGGCAAGTT AATACCTGCT ATTGGTCAAG GCAATACAAA ACAAGTATTG ATTGTAATTT TACAAGCCTT AATTATCTTT ATCATTCAAA AAACAGCACA ATATCTACAA GATAGTCTTT TAGCAAAACC AGCATTAGCT CTAAGCCAAG ACTTACGAAC AACACTATTC AGAAAACTTC AAAAAACTAA TATTCTTTTT ATCGAAAAAC TTTCATCTGG GGATATTGCA TACAGACTTA CAGAAGATGT TGATCGAGTT GGGGAGGTTA TCTATAAATC GATTCAAGAT ACAACACCAT CGATATTTCA ATTATTGGCA GTATTTGGAT ATATGATATT TATTGATTGG AATTTATCAC TTGCAACGAT CATATTAGCG CCTTTAATTG CTTTATTAGT AAGTGATTTT GGAGGGAAAG TATTAAAAGC ATCTGAACAA AGTCAAAACA AAATTAGTTC ATTAGCAGGT TTGCTATCAG AGGCTGTTCA AGGTCTACCA ATGGTTAAAG CATTTGCTGT AGAAGCATGG CTTCAAGATG ATTTTGATAA ACAAGTTAAA TTACACAAAG AGGCTAAATA TAAAATGCTA AGGCTTGTAG CCCTTCAGCA TCCAATAGTG GGATTAATAG AAATAATAGG TATTTTAGGG ATCCTCACAA TAGGAACTTA TAGAATACAA ACAGGAGGTA TGTCTAACGA AGAATTTGCT AGTTATTTTA CAGCCTTAAT AATGTTAATT GATCCAATAA GCCATATTAC TACCAACTAC AACGAATTAA AGCAAGGACA AGCTTCACTA AGAAGATTAA ATGAAATAAC AAATAAACCA ATAGAAATAT CAAGCTCAGA CAGAGGCATT ACTCCTGATA GAATAGATGG AAAGTTATCA TTTAAGGATG TATTTTTCTC ATATAATGAT GATAAAGAGG TTTTAAAAAA AATTAATTTA GAGATAGATA ATGGAAAAAT AACGGCATTA GTTGGACCTT CAGGAGCAGG AAAAAGTACA ATCTTTTCTT TAATTTTAAA ATTCATAGAA CCTTCTAATG GATCAATATT TATTGATAAT TATAATTTAA ACAAATTAAA TACCAATTAC TTAAGAAGAT TAATAGGTAT AGTTCCGCAA AAAACATTTA TATTTTCAGG GACCATATCA GAAGCAATAA GATTTGGAAG GCCAACCACT AAAGCAAACA TAGTTAATGC AGCAAGAATT GCAAATGCTC ATGATTTTAT TGAAGAATTA CCCGACGGCT ATGAAACTTT TATAGAAGAG AGGGGTAGCA ATCTTTCTGG AGGTCAGTTA CAGAGAATAT CAATAGCAAG AGCTTTATTA GGAGATCCAA CAATTTTATT GCTAGATGAA GCTACTAGTG CCCTAGATGC TGAATCGGAG GAATCTGTTC AGAAGGGTCT TCAACAGGCT ATGCACAATC GAACAGTCTT GGTAATTGCT CACAGATTAT CAACAATACA AAAGGCAGAC AAAATAGCTG TGATTGAAAA AGGCGAAGTA CTTGAAGTAG GTAGCCATAA AGAATTAATT AATAGGCAAG GAAGATATAA GGATTTTTGC GATAAACAAA TAATCAAGAG CTATTAA
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Protein sequence | MKQKNKINFI YLIGKLKGHL PTLLLGGISM FIYVICWPIL AWLSGKLIPA IGQGNTKQVL IVILQALIIF IIQKTAQYLQ DSLLAKPALA LSQDLRTTLF RKLQKTNILF IEKLSSGDIA YRLTEDVDRV GEVIYKSIQD TTPSIFQLLA VFGYMIFIDW NLSLATIILA PLIALLVSDF GGKVLKASEQ SQNKISSLAG LLSEAVQGLP MVKAFAVEAW LQDDFDKQVK LHKEAKYKML RLVALQHPIV GLIEIIGILG ILTIGTYRIQ TGGMSNEEFA SYFTALIMLI DPISHITTNY NELKQGQASL RRLNEITNKP IEISSSDRGI TPDRIDGKLS FKDVFFSYND DKEVLKKINL EIDNGKITAL VGPSGAGKST IFSLILKFIE PSNGSIFIDN YNLNKLNTNY LRRLIGIVPQ KTFIFSGTIS EAIRFGRPTT KANIVNAARI ANAHDFIEEL PDGYETFIEE RGSNLSGGQL QRISIARALL GDPTILLLDE ATSALDAESE ESVQKGLQQA MHNRTVLVIA HRLSTIQKAD KIAVIEKGEV LEVGSHKELI NRQGRYKDFC DKQIIKSY
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