| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_10381 |
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| Symbol | recJ |
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| ID | 4779951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 956195 |
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| End bp | 958084 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640084317 |
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| Product | DHH domain-containing protein |
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| Protein accession | YP_001014861 |
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| Protein GI | 124025745 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000112269 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGAAACAG ATAAAGACCT TGTGAATCGA TGGATATTAC CTAAGCCAAT AAATGAAGAT
GATATAACTA ATATAAATTT AAATCACACT CTTCAAGCCG TCTTAATTAG GAGAGGGATC
GATCTAAATA ATGAATTTGA TGAATATATA ACACCATCAG ACCTACCAAA TCCTGAAGAA
CATTTCGATG AATTATCTAA AGCGACTCAA AGAATAATTA ATGCTTGCTT AAAAAAAGAA
AAGATTGCAA TATGTGGTGA TTACGACGCG GATGGTATAA CAAGTACTGT GCTTTTAGTC
GAATTATTGT CAATACTTGG AGCAATAGTT AAGCCGTTTA TACCTTCAAG ACAGGATGAG
GGTTATGGCC TTAATGAAAA CATGATAAAT AATATAAATA ATCAAGGAAT TAAGCTTGTA
ATTACTGTGG ATAATGGCAT ATCTGCATTT GCCGCAATCA AGAAATCTGT TGATCTTGGG
ATCGATTTAA TTATCACAGA TCACCATAAA ATACCTGATA AGAAATTAAA TATTTTTTCG
CTTATACATC CAGAAAAAAC TCCTATTAAT TCACCTTATA AATATTTGGC AGGTGTAGGT
ATTGCATACC TACTAGCAAA GAATATATGT GAGAAGATTG ATTATGATAT AAACAATTCT
ACGGCAAATA TATTCTTTTG TATTGGCACT ATTGCGGACA TGGCTCCCCT TAAAGGTGCC
AATAGAAAAT GGCTTAAAGA GTGTTTACCA AAAATAAATT CGACAACTAA TAAAGGGATT
AAATCTATAA TGAAGAAGCT ATCAATTCAT AATGTTGATA TAACATCAGA TGATATTGGG
TTTAAGATAG CGCCTTTAAT AAATGCTGTC GGTAGAATTG GTGACCCCAA CCTTATCATT
GATCTCTTTA CAAATAAATC AAATGATTCA GTAGTTAAAC TCACAAATGA TTGTTTTAAT
ATGAATAGGG AAAGAAAAAG ATTAACGTCC TTAGTTGAAC AAGAAGCTCT AGAAATAGCA
GTAAGTGAAT ATAGAAGTGA TAGAAAATTT CTAGTATTAA CTAAGAGAGA ATGGCACCCT
GGAATAATAG GAATAGTTGC GGCTAGAATA GCTGAAAAGT TTAATTTACC AACTGCTTTA
CTTGCACAAG CAAATGATGG GAACTTCAGA GGATCTATAA GATCAAACAA TAAATTAATG
GTCAACCAGG CCTTAGCTGA ATGCGATGAT CTTTTAATAG CGCATGGAGG CCACTCAGCC
GCTGCAGGGT TTTCAATTAA AAACGAAAAT ATTGATAAGC TTAGAGAAAA GCTAGATCAA
ATAGCTAACC GAGAATTTAA AGATATTAAT TTATATAAGT CAATAACTCC TGATGCATTT
ATTAGTTTTG ATCAAATTAA TTATAATTTT TATAGACAAT TAACTTTGAT AGGTCCATTT
GGAATAATGA ATCCTACACC GATTTTCTGG GCAAGAAAGT GCAAAATCCT AGATATCTAT
AAACTAAAGG GTGATCACCT AAAAATGACT CTTAATGACG GAACATCGAC AATAGAAGCA
ATTAAATGGA ATGGATCTAC TGAATTAAAA AAACAAGATT TAATTGATAT CGCATTCTAT
ATTGAAATAA ATAGATGGAA AAAATTAAAT ACACTGCAAT TAAATATTTT AGATATTAAA
CATCATAAAG ATATAGTTAG TTTACAATTG CACAGTCGAA TGTATAAATG CCAATTAATG
GACACAAAGA ATATATTAAT CACTAACTCA AAAGGCCAGT CTTTTAGTTC AGACTTATCA
ATATCATCTG AGAATTTAAA TGTAGATCAG AAAGTATTTG CAAAAAAAAT TCTTACTTTC
GCAAAGATTG CACTAGGTAA GGCTGCTTAG
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| Protein sequence | METDKDLVNR WILPKPINED DITNINLNHT LQAVLIRRGI DLNNEFDEYI TPSDLPNPEE
HFDELSKATQ RIINACLKKE KIAICGDYDA DGITSTVLLV ELLSILGAIV KPFIPSRQDE
GYGLNENMIN NINNQGIKLV ITVDNGISAF AAIKKSVDLG IDLIITDHHK IPDKKLNIFS
LIHPEKTPIN SPYKYLAGVG IAYLLAKNIC EKIDYDINNS TANIFFCIGT IADMAPLKGA
NRKWLKECLP KINSTTNKGI KSIMKKLSIH NVDITSDDIG FKIAPLINAV GRIGDPNLII
DLFTNKSNDS VVKLTNDCFN MNRERKRLTS LVEQEALEIA VSEYRSDRKF LVLTKREWHP
GIIGIVAARI AEKFNLPTAL LAQANDGNFR GSIRSNNKLM VNQALAECDD LLIAHGGHSA
AAGFSIKNEN IDKLREKLDQ IANREFKDIN LYKSITPDAF ISFDQINYNF YRQLTLIGPF
GIMNPTPIFW ARKCKILDIY KLKGDHLKMT LNDGTSTIEA IKWNGSTELK KQDLIDIAFY
IEINRWKKLN TLQLNILDIK HHKDIVSLQL HSRMYKCQLM DTKNILITNS KGQSFSSDLS
ISSENLNVDQ KVFAKKILTF AKIALGKAA
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