Gene NATL1_10301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_10301 
Symbol 
ID4779350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp950259 
End bp950801 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content31% 
IMG OID640084308 
Producthypothetical protein 
Protein accessionYP_001014853 
Protein GI124025737 
COG category[S] Function unknown 
COG ID[COG5135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.143046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00037794 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACCAT GGTTTACTCA ACTTAGCTCA GTTCAGAGAA AAGAATCAAA ATTAGACTCT 
TCAAGATGGC TACAACTAGC CACAATTGGA ATAGATAATA ATCCCAGAGT AAGAACAGTA
GTTTTTAGAG GATGGAGTAA ATCCTATGAA ATGGAAATAT ATACTGACAA AAGAAGTCAA
AAATATCATG AATTAAATTT GAACAATAAC GTAGAAATAT GCTGGCTTTT TTCAAGATCA
AAATGTCAAT TCAGGTTTAG AGGAACTTCA ACAATTGAAT CAGATAAATA CAACCTTCTA
CATTGGGAAA AACTAACTGA ACAATCTAGA TTAATGTGGA GTTGGCCAAC TCCAGGTAAT
CAATTTAATC TTGAAAAAAC TAATGATTTT TCTGTCAAAT CAATTAAAGA GTTATCAAAT
AATTTCACTG TATTAAAGAT TAAAATCAAC CATGTTGACC AATTGCTTCT TCGTAAACCT
GTTCATACAA GAAGAAGGTG GATACGTGCT AATGACTGGA AAGAAGAAAG TATAAACCCT
TAA
 
Protein sequence
MPPWFTQLSS VQRKESKLDS SRWLQLATIG IDNNPRVRTV VFRGWSKSYE MEIYTDKRSQ 
KYHELNLNNN VEICWLFSRS KCQFRFRGTS TIESDKYNLL HWEKLTEQSR LMWSWPTPGN
QFNLEKTNDF SVKSIKELSN NFTVLKIKIN HVDQLLLRKP VHTRRRWIRA NDWKEESINP