Gene NATL1_10021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_10021 
Symbol 
ID4780882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp923579 
End bp924142 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content30% 
IMG OID640084280 
Producthypothetical protein 
Protein accessionYP_001014825 
Protein GI124025709 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.764651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.386426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT CGCCAGAGAC ATATTTATGG TTTAAATCAT TTCATATTAT CGGCGTAGTT 
GTTTGGTTTG CAGGTTTATT TTATTTAGTT AGATTATTTA TTTACCATGT TGAAGTACAA
ACTCAGAAAG AGGAAATTAG GGAAGTTTTT AATAAGCAAT ATTCTTTAAT GGAGAAAAGG
TTAGCTAATA TAATTACCAC TCCAGGAATG GTATTGGCTG TTATAATGGC AACTGGTCTA
TTGTATATGC AGCCTTCATA TCTATCGCAA GTATGGATGC AAGTTAAATT ATTATTTGTA
TTATTTCTAC TTATATATCA TTTTTATTGT TATAGAATTA TGAATCAATT AAATAATAAT
CAGTTTAATT TTACTGGTCA GCAACTACGA GCATTGAATG AGTTGCCAAC ACTACTATTG
GTAGTTGTAG TAATGCTTGT TGTATTTAAA AACCAATTCC CAACAAGTGC TGCAAGTTGG
TTGATATTTG GGTTAATACT TTTTATGGCT GCAAGTATAC AATTTTATGC CAAATGGCGC
AGGAACAAGA AACAACTTAC TTAG
 
Protein sequence
MNFSPETYLW FKSFHIIGVV VWFAGLFYLV RLFIYHVEVQ TQKEEIREVF NKQYSLMEKR 
LANIITTPGM VLAVIMATGL LYMQPSYLSQ VWMQVKLLFV LFLLIYHFYC YRIMNQLNNN
QFNFTGQQLR ALNELPTLLL VVVVMLVVFK NQFPTSAASW LIFGLILFMA ASIQFYAKWR
RNKKQLT