| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_10011 |
|---|
| Symbol | uvrC |
|---|
| ID | 4780129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 921564 |
|---|
| End bp | 923486 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640084279 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001014824 |
|---|
| Protein GI | 124025708 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.404154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.496638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTAA TACCGTTAAT AAGGGACAAG TCAAGATTAT CGGATTTTTT GAAGGATATA
CCTAATGATC CTGGATGTTA TTTGATGAAA GATGGTGAGG ATAGATTGCT TTATGTTGGT
AAATCTAAAA AGTTAAGGAA TAGAGTTAGA AGTTATTTTC GTTCAGGTAA TGAATTAAGT
CCTAGAATAT CTTTAATGGT GAGACAAGTT GCAGATATTG AATTGATAGT TACTGATAAT
GAAAGTGAAG CATTAACATT AGAATCAAAT TTAATTAAAT CTCACCAACC ATATTTCAAT
GTCTTACTAA AAGATGATAA AAAGTATCCC TATGTTTGTA TTACTTGGGG TGATAAATAT
CCAAGAATTT TTTTAACTAG AAAAAGGCGT CAACGACAAT TAAAAGATAA ATATTATGGT
CCTTATGTAG ATGTTTATTT ACTTAGAAAA ACTCTATTTA GTATAAAAAA ATTGTTTCCA
CTCAGGCAAA GAAGAATTCC GCTTTATAAG GATAGAACAT GCCTTAATTA TTCAATTGGA
AGATGCCCTG GTGTTTGCCA GGAAGAAATA AGTTCAGAAG ATTACAAAAA CACTTTAAAA
AGAGTTGAAA TGATATTTCA AGGAAGAACG GATGAATTAA GAATATTATT AGAAAAACAA
ATGATTTCTT TTTCAGAGTC ATTGAAATTT GAAGAGGCTG GATCAGTTAG AGATCAGCTT
AAGGGTATAG ATAGATTGTA TGAATCTCAA AAGATGATCA TACCAGATTC ATCTGTTTGT
AGGGATATAA TTGCAATGGC ATCAGAAGAA AATATAAGCT CAGTACAAAT TTTTCAAATG
CGATCAGGTA AATTAATTGG TCGTTTAGGA TATTTCTCAG ATAATAGTAA TTTTAATTCA
TCTCAAATAC TTCAACAAGT AATAGAAAAT CATTATTCAA ATGTAGATCC TGTTGAAATC
CCATCAGAAA TATTAGTTCA ACATCAACTT GTAAATAATA TTTTAATTTC AGATTGGCTT
AGTGAAATAA AAAAGCAAAA AGTTAATATA AATGTTCCTA AAAGATCTAG AAAAGCAGAG
ATTATTAAAC TCGTAGAAAA AAATGCTAAT TTAGAATTAC AAAGAATTAA ACAATCTCAT
GATAAGAATT TAGTTGAACT TGATGATCTG ACTAATATCC TTGATTTAGA AAATATTCCA
AAGAGAATTG AATGTTATGA CATAAGCCAT ATCCAAGGAA GTGACGCTGT TGCATCACAA
GTAGTATTTA TTGATGGTAT TGCGGCAAGG CAACACTATA GAAGATATAA AATTAAAAGC
CCAAATATAA AAATTGGTCA CAGCGACGAT TTCGAATCAA TGGCTGAAGT GATAACTAGA
AGATTTAGAA GATGGGCTCG TTTTAAAGAA GAAGGTGGAG ATATTAATGC CCTACTAAGT
AATCAAAGCA GTGTTCTAGA TAACCTGAAT TTAAATGACT GGCCAGATCT CGTTGTGATA
GATGGAGGTA AAGGTCAATT AAGTTCTGTC GTAGCTGCTC TTGAGGAACT TAAACTTGAT
CAAAATTTAA ATGTTATATC TTTAGCAAAA AAGAAGGAGG AAGTTTTTAT TCCTAATGTT
AAACAATCAT TAGTTACCGA ATCAAATCAA CCAGGAATGC TTTTGCTAAG GAGACTGAGA
GATGAAGCTC ATAGATTTGC AATTACTTTT CATAGGCAAA AAAGGAGTCA ACGGATGAAA
CGTTCTCAGT TAAATGAAAT ACCGGGTCTT GGACCTCAAA GAATAAAATT ATTGCTTGAG
CATTTCAGGT CAATTGAGGC AATACAAATG GCTACTTTTT CTGAACTTTC ATCAACACCC
GGCTTAGGCA GATCAACTGC TGTTGTTATT AGAAACTATT TTCATCCCGA TAAAAATAAA
TAA
|
|---|
| Protein sequence | MELIPLIRDK SRLSDFLKDI PNDPGCYLMK DGEDRLLYVG KSKKLRNRVR SYFRSGNELS
PRISLMVRQV ADIELIVTDN ESEALTLESN LIKSHQPYFN VLLKDDKKYP YVCITWGDKY
PRIFLTRKRR QRQLKDKYYG PYVDVYLLRK TLFSIKKLFP LRQRRIPLYK DRTCLNYSIG
RCPGVCQEEI SSEDYKNTLK RVEMIFQGRT DELRILLEKQ MISFSESLKF EEAGSVRDQL
KGIDRLYESQ KMIIPDSSVC RDIIAMASEE NISSVQIFQM RSGKLIGRLG YFSDNSNFNS
SQILQQVIEN HYSNVDPVEI PSEILVQHQL VNNILISDWL SEIKKQKVNI NVPKRSRKAE
IIKLVEKNAN LELQRIKQSH DKNLVELDDL TNILDLENIP KRIECYDISH IQGSDAVASQ
VVFIDGIAAR QHYRRYKIKS PNIKIGHSDD FESMAEVITR RFRRWARFKE EGGDINALLS
NQSSVLDNLN LNDWPDLVVI DGGKGQLSSV VAALEELKLD QNLNVISLAK KKEEVFIPNV
KQSLVTESNQ PGMLLLRRLR DEAHRFAITF HRQKRSQRMK RSQLNEIPGL GPQRIKLLLE
HFRSIEAIQM ATFSELSSTP GLGRSTAVVI RNYFHPDKNK
|
|---|
| |