| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_09951 |
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| Symbol | dapF |
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| ID | 4779633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 916608 |
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| End bp | 917462 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640084273 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001014818 |
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| Protein GI | 124025702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.51158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATA ATTTTTCAAA ATATCAAGGA CTTGGTAATG ATTTTATTAT CTTTGATGCT
CGTAGTAACA ATTTAGATCA CTTATTTTCA AAAAATAAAG ATAATTTTAT TGAGCACCTA
TGTAATAGAA ATTTTGGCAT CGGAGCTGAT GGGATTATTC TTATATTAGA GTCTAATAAT
AAATGTTTTG TAAGAATGAA AATTTATAAT TCTGATGGTT CCGAGCCAGA AATGTGTGGC
AATGGTATTA GATGTCTGAT TGCTTTTTTG AATGATAATA ATGAAATCAA TGAATTGTCT
GAGATCCCTA TTGAGACCAA AGCGGGTCTT ATCCTTACTT CTATTGATTG TAATGAAAAT
ATAAAAGTAA ATATGGGTGA ACCTATCCTT TCTCCTCTAG ATATACCCAC GAAATTATTG
ATGAACAGTT TAAAAGTTCC TAATGGTGTG ATTACATTAA AAGATCAAAT ATTAAATGTT
TATGCTGCTA GTATGGGGAA TCCTCATATG ATCGTTTTTG TTAATGATAT TGAAGGGATA
CCATTTCAAG AATGGGGTAG TTTCCTTGAA AAACATAATA CATTTCCAAA TGATACCAAT
GTTCACTTTG TTGAAATAAT CGATAAGTCA AATATTAAAG TAAAGGTATG GGAAAGGGGT
TGCGGCCCAA CATTAGCTTG TGGTACTGGA GCATGCGCTT GTCTGGTAGT TACCTCTAAG
TTAGGGAAAA CTTTAAACAA CGCTAATGTC TATTTACCAG GCGGCAAATT AGAAGTTGAA
TGGCCAAATC AGTCAGGTCC CGTTTTCATG CAAGGACCAG CTTTAAAAGT ATTTAGTGGA
GAGATAGATA TTTAA
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| Protein sequence | MKNNFSKYQG LGNDFIIFDA RSNNLDHLFS KNKDNFIEHL CNRNFGIGAD GIILILESNN
KCFVRMKIYN SDGSEPEMCG NGIRCLIAFL NDNNEINELS EIPIETKAGL ILTSIDCNEN
IKVNMGEPIL SPLDIPTKLL MNSLKVPNGV ITLKDQILNV YAASMGNPHM IVFVNDIEGI
PFQEWGSFLE KHNTFPNDTN VHFVEIIDKS NIKVKVWERG CGPTLACGTG ACACLVVTSK
LGKTLNNANV YLPGGKLEVE WPNQSGPVFM QGPALKVFSG EIDI
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